Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bursaphelenchus_20xylophilus_20[genbank_20GCA_5F000231135.1_202011- 10-13] 10,432 sequences; 73,085,728 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq8142 127 4e-24 >seq8142 Length=52432 Score = 127 bits (140), Expect = 4e-24 Identities = 351/526 (67%), Gaps = 23/526 (4%) Strand=Plus/Plus Query 212858 CATGTCCTCGTTCCAGAGGCCCCTGGTC-TCCAGGCACTTGACCAGGTGAGGGTTGACTA 212916 |||||||| |||||| |||| | | || | ||| ||||| || ||||||| | Sbjct 5255 CATGTCCTTGTTCCATCGGCCGATTGCGATCAAATCACG-GACCAAATGTTGGTTGACGA 5313 Query 212917 TCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGC 212976 |||||| || || | ||| || ||| ||| | ||| || |||||||| || | | Sbjct 5314 CCTGGAAATCGCCCTTGGTCACTCTTCTCGTGTACATGTTGGAGGTGTAGGGTTCAAAGG 5373 Query 212977 TCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGAC 213036 |||||| || ||||| ||||| |||||| ||| |||||||| ||||| || ||||| Sbjct 5374 CCTCGTTATTGCCCAGGATCTGGGCAGTGGAGGCGGTGGGCATCGGAGCGACGAGGAGGG 5433 Query 213037 TGTTCCTCACTCCGTGCTCGCCGATGA-GGCGCCGAAGCTCTGCCCAGTCCCATCTGCCA 213095 || | || | | | ||| ||| | || | | |||||||||| Sbjct 5434 AATTGCGGCAACCATATTTGGCGACCTTGGCCCTGAGGGAAT-CCCAGTCCCAG------ 5486 Query 213096 GACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATG-CCTTTGCTCACGGG 213154 || || | || || ||| | ||| || ||| || |||||| || || Sbjct 5487 ---AGATCTGTGGGTTTTACACCCCAGAGGTCGGGTTG-AAGCTGGCCTTTGGACATTGG 5542 Query 213155 GCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGCAG 213214 ||||| ||| | |||||| ||| ||||||||||| |||||| || |||| ||| Sbjct 5543 AGAGCCCTCGTAGGTCTCGTAGGGTCCAAACTCCTTGGCCAACTCGCATGAGGCCTCCAG 5602 Query 213215 GGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGACGT 213274 ||| || | ||||||||| || || |||| ||||||| |||||||| | || Sbjct 5603 GGCCGCATGGTAGATGGTCTCGAAGATCTGAATGTTGAGGAGCTTGGCCTTGTCGCTGGT 5662 Query 213275 GAAGGGCA---TCATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGAT 213331 ||| |||| |||||| || | || | || ||||| |||||||| ||||| ||||| Sbjct 5663 GAACGGCAGTCTCATCA-GCAT--AAAGGCGTCGGCCAGACCCTGGACTCCGATTCCGAT 5719 Query 213332 GGGTCTGTGTCTCAGGTTAGACTTG-GAGCACTCCTCCAAGGGGTA 213376 ||| | || | || || |||||| | || ||| || | |||||| Sbjct 5720 GGGACGATGGCGGAGATTGGACTTGCGCGC-CTCTTCGATGGGGTA 5764 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931411328122880