Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bursaphelenchus_20xylophilus_20[genbank_20GCA_5F000231135.1_202011- 10-13] 10,432 sequences; 73,085,728 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq8142 96.9 6e-15 >seq8142 Length=52432 Score = 96.9 bits (106), Expect = 6e-15 Identities = 127/176 (72%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 221366 CCATCGTACGACTCGTAGGGACCGTACAGTTCGGCCTGGGCGCAAGACTGCGTCAGGGCA 221425 || ||||| | ||||||||| || || | |||| |||| || | |||||| Sbjct 5547 CCCTCGTAGGTCTCGTAGGGTCCAAACTCCTTGGCCAACTCGCATGAGGCCTCCAGGGCC 5606 Query 221426 GCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGAGAAGTGAAG 221485 || |||||||||||||| |||||| ||||||| |||||||| | ||||| Sbjct 5607 GCATGGTAGATGGTCTCGAAGATCTGAATGTTGAGGAGCTTGGCCTTGTCGCTGGTGAAC 5666 Query 221486 GGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGATGGG 221541 |||| | || || | |||| |||||||||| ||||| |||||||| |||||||| Sbjct 5667 GGCAGTCTCATCAGCATAAAGGCGTCGGCCAGACCCTGGACTCCGATTCCGATGGG 5722 Score = 91.5 bits (100), Expect = 3e-13 Identities = 103/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 221104 GACCATGTGCTTGTTCACCACTTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTT 221163 ||||| || | ||| || || |||||||| ||| | ||| || ||| ||||| ||| Sbjct 5294 GACCAAATGTTGGTTGACGACCTGGAAATCGCCCTTGGTCACTCTTCTCGTGTACATGTT 5353 Query 221164 AGAAGTGAACGGTTCGATGCTCTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGG 221223 || ||| | ||||| | | |||||| |||||||||||||| || ||| ||||||||| Sbjct 5354 GGAGGTGTAGGGTTCAAAGGCCTCGTTATTGCCCAGGATCTGGGCAGTGGAGGCGGTGGG 5413 Query 221224 CATGGGTGCCACCAGCAG 221241 ||| || || || || || Sbjct 5414 CATCGGAGCGACGAGGAG 5431 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928723678638080