Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bursaphelenchus_20xylophilus_20[genbank_20GCA_5F000231135.1_202011- 10-13] 10,432 sequences; 73,085,728 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq7308 96.9 4e-15 >seq7308 Length=4326 Score = 96.9 bits (106), Expect = 4e-15 Identities = 161/233 (69%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242 || ||||| || || | || || ||||| |||||||| || |||||||| ||||| || Sbjct 3729 ACTCCAATTGGCCCAGCTCCGGGTCCTCCGCCTCCATGAGGGATACAGAAAGTCTTGTGC 3670 Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCA 138302 ||||| | ||| | ||||| || || || | ||| | || || ||||| || Sbjct 3669 AAATTCAAATGGGACACATCGCTGCCGTAATCGCCGGGTCTGCACAGTCCAACCTGCGCG 3610 Query 138303 TTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATATC 138362 || | ||| || ||||| | ||| || || || ||||| || || | | ||||| | Sbjct 3609 TTGAAATTGGCTCCATCCAAATAAACTTGGCCTCCATTTTCGTGGATTTTGTTACACACA 3550 Query 138363 TGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAAT 138415 | |||| | |||||| || ||||||||||| || || || | |||||| Sbjct 3549 TCCATGATTGAAGATTCAAAAACTCCATGAGTCGACGGGTAGGTTACCATAAT 3497 Score = 84.2 bits (92), Expect = 3e-11 Identities = 84/109 (77%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 139298 CATATTTGCGAGCAGTGCTTGTGCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAAT 139357 |||||| || | ||| || || || ||||||||||| ||| ||||| ||||||| ||| Sbjct 1610 CATATTAGCCAACAGAGCCTGGGCAGTGCAGATGTTCGAGGTGGCTTTATCTCTTCGAAT 1551 Query 139358 ATGCTGCTCTCTAGTTTGTAGTGCTAATCTGTATGCAGGATTGCCTTCG 139406 ||||||||||| || || | || |||| ||| || ||||||| ||| Sbjct 1550 GTGCTGCTCTCTGGTCTGCAAAGCCAATCGGTAGGCTTGATTGCCCTCG 1502 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578922898608640