Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bursaphelenchus_20xylophilus_20[genbank_20GCA_5F000231135.1_202011- 10-13] 10,432 sequences; 73,085,728 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq10256 84.2 3e-11 >seq10256 Length=21994 Score = 84.2 bits (92), Expect = 3e-11 Identities = 199/299 (67%), Gaps = 10/299 (3%) Strand=Plus/Minus Query 48075 ACCATAAGGAGAACGTGGATAGAAAGGTGTGGTCTCTGTCTGTGGAGTCTCTTGCACCTT 48134 |||||||||||| | ||||| ||||| || || || | ||||| ||||||| || || Sbjct 2355 ACCATAAGGAGATCTGGGATAAAAAGGAGTTGTTTCCTTTTGTGGGATCTCTTGAACTTT 2296 Query 48135 ACCATAAAGTTCACTGGTGGATGCTTGATAGATACGAACCCTAT-----CTTCCATCTCA 48189 ||||| || ||| || || |||||||| | | ||| | | |||| || Sbjct 2295 TCCATAGAGCTCAGAAGTTGACGCTTGATAAAATCTGACCTTCTTGGTGAGTCCA---CA 2239 Query 48190 AGCAAACGGACTGCCTCAAGCACTCTCAGGGTGCCTATGGCATCTGTCTGACCAGTATAC 48249 ||| | ||| || || | || || ||| || |||| ||||| | | | ||||| Sbjct 2238 AGC--ATGGATCGCGTCCAACAATCGCAGCGTTCCTACCGCATCAACTTCAGCCGTATAT 2181 Query 48250 TCGGGCATCTCAAACGAAACCTTTACATGACTCTGTGCCCCAAGATTATAAATCTCATCT 48309 ||||| | ||||| ||||| || |||||||| || || | | || ||| | || | Sbjct 2180 TCGGGGAGATCAAAAGAAACTTTGACATGACTTTGAGCGGCCAAATGATAGACTTCGGTT 2121 Query 48310 GGTTGAACCTGCTGAATAACCCTCACTAAATTTGTAGAGTCTGTTAAGTCTCCATAATG 48368 ||||| | ||| ||| | | | | || | || ||||| || | || |||||||| Sbjct 2120 GGTTGGATCTGAGTAATCAGCTTGATTAGACATGATGAGTCGGTCATATCGCCATAATG 2062 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665407619530240