Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bursaphelenchus_20xylophilus_20[genbank_20GCA_5F000231135.1_202011- 10-13] 10,432 sequences; 73,085,728 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq7077 87.8 5e-12 seq4549 87.8 5e-12 >seq7077 Length=10159 Score = 87.8 bits (96), Expect = 5e-12 Identities = 186/275 (68%), Gaps = 2/275 (1%) Strand=Plus/Minus Query 302575 TCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTA 302634 ||||| |||||| | || ||||| || || || || | ||||| || || ||| Sbjct 3418 TCCATGGCCTTGATCAGCCGGCGCTGGATGTAGCCGGTCTCGGCGGTTTTGACGGCCGTA 3359 Query 302635 TCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGT-AGCCC 302693 || || || || |||| || ||||| || |||||||| | ||| | || ||| || || Sbjct 3358 TCGATCAGTCCCTCACGTCCTCCCATCGCGTGGAAGAAGAACTCGGCGGG-CGTGAGGCC 3300 Query 302694 CCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAA 302753 | | | ||| |||| ||||| ||||||| || || | |||| ||| | || Sbjct 3299 GGCCAGGTACGAGTTCTCCACGAACCCACGCGAATCCGGTCCGTTGTCGTCTTTGATGAA 3240 Query 302754 GTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTG 302813 ||| || ||||| | || | | ||| | || || ||||| || || ||||||||||| Sbjct 3239 GTGGGGGAGGGTTCGGTGCCGGAAACCGAACGGAATTCGCTTACCCTCCACGTTCTGCTG 3180 Query 302814 TCCCAGGCACGAAATCATCTGCGAAATATTTAAAT 302848 |||| || | ||| | ||| || | ||| ||| Sbjct 3179 GCCCACACAGGCAATAACCTGAAAATTTTTTGAAT 3145 >seq4549 Length=14857 Score = 87.8 bits (96), Expect = 5e-12 Identities = 143/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 289021 CtttttttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTC 289080 |||||| | || || |||||||||||||| ||||| | | || || || || | || Sbjct 13828 CTTTTTCTTCCGACCGCATCAATTTCGTCGATGAACAAGATGCATGGGGAGTTCTTTCGG 13769 Query 289081 GCAATTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAAT 289140 || || ||||| | || | || | | | |||| ||||||| ||||||| | ||| Sbjct 13768 GCCATGGCAAACATATCACGGACTCTTGCGGGGCCAACACCAACAAACATTTCGAGGAAT 13709 Query 289141 TCAGAAGCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGA 289200 || || |||| || ||||| | ||||| ||||| || || ||| | |||||| Sbjct 13708 TCTGATCCGGAGACAGTGATGAAGGGGACATTGGCTTCTCCGGCGGTTGCTTTGGCCAGA 13649 Query 289201 AGTGTCTTACCTGTTCCAGGTGGTCC 289226 || |||||||| || || || || || Sbjct 13648 AGGGTCTTACCAGTACCTGGAGGACC 13623 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471620876859584