Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bursaphelenchus_20xylophilus_20[genbank_20GCA_5F000231135.1_202011- 10-13] 10,432 sequences; 73,085,728 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq9793 96.9 3e-15 >seq9793 Length=2388 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 ||||||| || | ||| || ||||| | ||||||||| || || |||||||| ||| Sbjct 1409 CCTCCTCTCAACCTCAACACCAAATGGAGTGTAGATTCCTTCTGGATGTTGTAGTCGGAA 1468 Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304 | || | |||||||||||||| || || |||||| | || || || || || Sbjct 1469 AGAGTACGGCCATCTTCGAGTTGTTTTCCGGCGAAGATCAATCTCTGTTGGTCTGGTGGG 1528 Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364 || ||||| ||||| || ||| || | | || | |||||| ||| ||| || Sbjct 1529 ATTCCTTCCTTGTCTTGGATCTTTGCCTTGACATTCTCGATCGTGTCGCTGGCTTCAACC 1588 Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 137412 |||| ||| | ||||| || |||| || || ||||| || |||||| Sbjct 1589 TCAAGAGTGATGGTCTTTCCAGTCAGGGTCTTCACGAAGATCTGCATA 1636 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 || |||| || || | || ||||| | || ||||| || || ||||| ||||| Sbjct 1927 CCACCTCTCAACCGGAGCACCAAATGGAGAGTGGATTCCTTCTGGATGTTATAATCAGAA 1986 Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304 | || || ||||| | |||||| || ||| |||| ||||||||||| || || || Sbjct 1987 AGGGTTCTTCCATCTTCCAATTGTTTTCCGGCAAAGATGAGACGTTGCTGGTCTGGGGGG 2046 Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364 || ||||| ||||| || || || | | ||| | ||||| | | || || Sbjct 2047 ATACCTTCCTTGTCCTGGATCTTGGCCTTGACATTTTCGATGGTGTCGGACGCCTCGACC 2106 Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 137412 |||| ||| | |||||||||||||| || || || || || |||||| Sbjct 2107 TCAAGAGTGATGGTCTTGCCGGTCAAGGTCTTCACAAAGATCTGCATA 2154 Score = 86.0 bits (94), Expect = 6e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 137215 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 137274 || || || ||||| |||||||| || | |||| | ||||| | ||||| || Sbjct 1211 GTGGACTCCTTTTGGATGTTGTAGTCCGAGAGGGTGCGCCCATCTTCCAACTGTTTTCCG 1270 Query 137275 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 137334 || |||||| | ||||||||| || || || ||||||||||| ||| || || Sbjct 1271 GCGAAGATCAATCTTTGCTGATCTGGGGGGATTCCTTCTTTGTCCTGAATCTTGGCCTTC 1330 Query 137335 AGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 137394 | | || | |||||| | | ||| ||||| | || | ||||| || ||||| ||| Sbjct 1331 ACGTTCTCGATCGTGTCCGAAGCTTCGACTTCCAATGTGATTGTCTTTCCAGTCAACGTT 1390 Query 137395 TTTACGAATATTTGCAT 137411 || ||||| |||||||| Sbjct 1391 TTCACGAAGATTTGCAT 1407 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488480293862400