Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bursaphelenchus_20xylophilus_20[genbank_20GCA_5F000231135.1_202011- 10-13] 10,432 sequences; 73,085,728 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq9793 132 3e-26 >seq9793 Length=2388 Score = 132 bits (146), Expect = 3e-26 Identities = 176/241 (73%), Gaps = 4/241 (2%) Strand=Plus/Plus Query 33513 AAAATCGTCA--CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATG 33570 |||||| || ||||||||||| || | ||||||||| |||||| || || || ||| Sbjct 1915 AAAATCTGCATTCCACCTCTCAACCGGAGCACCAAATGGAGAGTGGATTCCTTCTGGATG 1974 Query 33571 TTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGC 33630 || ||||| || || || | | | || |||||||||||||||||||| || | ||| ||| Sbjct 1975 TTATAATCAGAAAGGGTTCTTCCATCTTCCAATTGTTTTCCGGCAAAGATGAGACGTTGC 2034 Query 33631 TGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTC 33689 || ||| | || | |||||| ||||| || || | | |||| || | |||||| Sbjct 2035 TGGTCTGGGGGGATACCTTCCTTGTCCTGGATCTT-GGCCTTGACATTTTCGATGGTGTC 2093 Query 33690 GCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | | || || |||| ||||| || || || || || || || |||||||||||||| Sbjct 2094 GGACGCCTCGACCTCAAGAGTGATGGTCTTGCCGGTCAAGGTCTTCACAAAGATCTGCAT 2153 Query 33750 A 33750 | Sbjct 2154 A 2154 Score = 113 bits (124), Expect = 3e-20 Identities = 164/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| | ||||| || || ||| ||| ||||| |||||||| || || Sbjct 1180 ACCACCACGAAGACGGAGGACCAAGTGGAGGGTGGACTCCTTTTGGATGTTGTAGTCCGA 1239 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||| ||||| | || ||||| ||||||||||| || ||||| | ||||||||| | || Sbjct 1240 GAGGGTGCGCCCATCTTCCAACTGTTTTCCGGCGAAGATCAATCTTTGCTGATCTGGGGG 1299 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||||||||| ||| || ||| || | || | ||||| | ||| | Sbjct 1300 GATTCCTTCTTTGTCCTGAATCTTGGCCTTC-ACGTTCTCGATCGTGTCCGAAGCTTCGA 1358 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || | ||||| || || || || |||||||| || ||||| ||||| Sbjct 1359 CTTCCAATGTGATTGTCTTTCCAGTCAACGTTTTCACGAAGATTTGCAT 1407 Score = 109 bits (120), Expect = 4e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || |||||||| | ||||||||||| || || || || || |||||||| ||||| Sbjct 1409 CCTCCTCTCAACCTCAACACCAAATGGAGTGTAGATTCCTTCTGGATGTTGTAGTCGGAA 1468 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || || | || || | |||||||||||| || ||||| | ||| || ||| | || Sbjct 1469 AGAGTACGGCCATCTTCGAGTTGTTTTCCGGCGAAGATCAATCTCTGTTGGTCTGGTGGG 1528 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||||| ||||| || || || | |||| || | |||||||| | ||| || Sbjct 1529 ATTCCTTCCTTGTCTTGGATCTT-TGCCTTGACATTCTCGATCGTGTCGCTGGCTTCAAC 1587 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 |||| ||||| || || || || | || || || |||||||||||| Sbjct 1588 CTCAAGAGTGATGGTCTTTCCAGTCAGGGTCTTCACGAAGATCTGCATA 1636 Score = 86.0 bits (94), Expect = 4e-12 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| | |||| ||| |||||| ||| || || |||||||| || || Sbjct 952 ACCACCACGAAGACGGAGGACCAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGA 1011 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||| ||||| | || || | |||||||||||| || || | ||| ||||| ||| | || Sbjct 1012 GAGAGTGCGGCCATCTTCAAGTTGTTTTCCGGCGAAGATGAGACGTTGCTGGTCTGGGGG 1071 Query 33642 CACACCTTCTTTGTC 33656 | ||||| ||||| Sbjct 1072 AATTCCTTCCTTGTC 1086 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328662208573440