Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bursaphelenchus_20xylophilus_20[genbank_20GCA_5F000231135.1_202011- 10-13] 10,432 sequences; 73,085,728 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq9793 120 7e-22 >seq9793 Length=2388 Score = 120 bits (132), Expect = 7e-22 Identities = 140/189 (74%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 |||||| | || ||||| || ||||| |||||||| ||| ||| ||||| |||| Sbjct 1392 AAAACGTTGACTGGAAAGACAATCACATTGGAAGTCGAAGCTTCGGACACGATCGAGAAC 1333 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| |||||||| || ||||||||||| || || |||||| | |||||| Sbjct 1332 GTGAAGGCCAAGATTCAGGACAAAGAAGGAATCCCCCCAGATCAGCAAAGATTGATCTTC 1273 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 |||||||| |||||||||||||| | || | | || |||||| |||| || ||||| Sbjct 1272 GCCGGAAAACAGTTGGAAGATGGGCGCACCCTCTCGGACTACAACATCCAAAAGGAGTCC 1213 Query 206365 ACTCTTCAC 206373 || || ||| Sbjct 1212 ACCCTCCAC 1204 Score = 102 bits (112), Expect = 2e-16 Identities = 139/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || ||||| || || || ||||| ||||| || || |||||| || |||| Sbjct 1164 AAGACCCTCACTGGCAAGACCATCACCTTGGAGGTCGAGGCTTCTGATACCATCGAGAAC 1105 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||| || || || ||||||||| || ||| ||| | || |||||| Sbjct 1104 GTGAAGGCCAAGATCCAGGACAAGGAAGGAATTCCCCCAGACCAGCAACGTCTCATCTTC 1045 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 |||||||| || | |||||||| | ||| | | || |||||| ||||||| ||||| Sbjct 1044 GCCGGAAAACAACTTGAAGATGGCCGCACTCTCTCTGACTACAACATCCAGAAGGAGTCC 985 Query 206365 ACTCTTCACCTTGT 206378 ||||| || || || Sbjct 984 ACTCTCCATCTGGT 971 Score = 95.1 bits (104), Expect = 3e-14 Identities = 141/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || || || ||||| || |||||| | || || ||| ||||| |||| Sbjct 1620 AAGACCCTGACTGGAAAGACCATCACTCTTGAGGTTGAAGCCAGCGACACGATCGAGAAT 1561 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| |||||| ||||| || |||||||| || ||| || ||| | |||||| Sbjct 1560 GTCAAGGCAAAGATCCAAGACAAGGAAGGAATCCCACCAGACCAACAGAGATTGATCTTC 1501 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 |||||||| || | |||||||| | ||| | |||| |||||| ||||||| || ||| Sbjct 1500 GCCGGAAAACAACTCGAAGATGGCCGTACTCTTTCCGACTACAACATCCAGAAGGAATCT 1441 Query 206365 ACTCTTCACCTTGTTTTGAG 206384 || || || | || ||||| Sbjct 1440 ACACTCCATTTGGTGTTGAG 1421 Score = 86.0 bits (94), Expect = 1e-11 Identities = 139/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| || || | || || || || |||||| | || || || || ||| Sbjct 2150 CAGATCTTTGTGAAGACCTTGACCGGCAAGACCATCACTCTTGAGGTCGAGGCGTCCGAC 2091 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || ||||| || ||| ||||| || || || ||||| || || ||| ||| Sbjct 2090 ACCATCGAAAATGTCAAGGCCAAGATCCAGGACAAGGAAGGTATCCCCCCAGACCAGCAA 2031 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || ||||| |||||||| || |||||||||||||| || | | ||||| ||| || Sbjct 2030 CGTCTCATCTTTGCCGGAAAACAATTGGAAGATGGAAGAACCCTTTCTGATTATAACATC 1971 Query 206353 CAGAAAGAGTCTACTCTTCA 206372 ||||| || || ||||| || Sbjct 1970 CAGAAGGAATCCACTCTCCA 1951 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181662837831872