Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bursaphelenchus_20xylophilus_20[genbank_20GCA_5F000231135.1_202011- 10-13] 10,432 sequences; 73,085,728 total letters Query= NC_026141.2 Length=4988 Score E Sequences producing significant alignments: (Bits) Value seq9392 80.6 8e-12 seq9174 80.6 8e-12 seq8875 80.6 8e-12 seq7963 80.6 8e-12 seq7881 80.6 8e-12 seq6745 80.6 8e-12 seq6078 80.6 8e-12 seq6077 80.6 8e-12 seq6076 80.6 8e-12 >seq9392 Length=185231 Score = 80.6 bits (88), Expect = 8e-12 Identities = 52/57 (91%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGG 2832 |||||||||||||||||| |||||||||||||||||||||| | ||||| | ||||| Sbjct 121056 TAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCACCGGTTCGATCCCGG 121112 Score = 80.6 bits (88), Expect = 8e-12 Identities = 52/57 (91%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGG 2832 |||||||||||||||||| |||||||||||||||||||||| | ||||| | ||||| Sbjct 167469 TAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCACCGGTTCGATCCCGG 167525 >seq9174 Length=36602 Score = 80.6 bits (88), Expect = 8e-12 Identities = 52/57 (91%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGG 2832 |||||||||||||||||| |||||||||||||||||||||| | ||||| | ||||| Sbjct 26942 TAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCACCGGTTCGATCCCGG 26886 >seq8875 Length=12940 Score = 80.6 bits (88), Expect = 8e-12 Identities = 52/57 (91%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGG 2832 |||||||||||||||||| |||||||||||||||||||||| | ||||| | ||||| Sbjct 5930 TAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCGCCGGTTCGATCCCGG 5986 >seq7963 Length=10882 Score = 80.6 bits (88), Expect = 8e-12 Identities = 52/57 (91%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGG 2832 |||||||||||||||||| |||||||||||||||||||||| | ||||| | ||||| Sbjct 9433 TAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCACCGGTTCGATCCCGG 9489 >seq7881 Length=10195 Score = 80.6 bits (88), Expect = 8e-12 Identities = 52/57 (91%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGG 2832 |||||||||||||||||| |||||||||||||||||||||| | ||||| | ||||| Sbjct 8829 TAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCACCGGTTCGATCCCGG 8773 >seq6745 Length=35891 Score = 80.6 bits (88), Expect = 8e-12 Identities = 52/57 (91%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGG 2832 |||||||||||||||||| |||||||||||||||||||||| | ||||| | ||||| Sbjct 496 TAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCGCCGGTTCGATCCCGG 440 Score = 80.6 bits (88), Expect = 8e-12 Identities = 52/57 (91%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGG 2832 |||||||||||||||||| |||||||||||||||||||||| | ||||| | ||||| Sbjct 1790 TAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCGCCGGTTCGATCCCGG 1734 Score = 80.6 bits (88), Expect = 8e-12 Identities = 52/57 (91%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGG 2832 |||||||||||||||||| |||||||||||||||||||||| | ||||| | ||||| Sbjct 12385 TAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCGCCGGTTCGATCCCGG 12441 >seq6078 Length=12177 Score = 80.6 bits (88), Expect = 8e-12 Identities = 52/57 (91%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGG 2832 |||||||||||||||||| |||||||||||||||||||||| | ||||| | ||||| Sbjct 1270 TAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCACCGGTTCGATCCCGG 1214 >seq6077 Length=1254 Score = 80.6 bits (88), Expect = 8e-12 Identities = 52/57 (91%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGG 2832 |||||||||||||||||| |||||||||||||||||||||| | ||||| | ||||| Sbjct 1015 TAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCACCGGTTCGATCCCGG 959 >seq6076 Length=8068 Score = 80.6 bits (88), Expect = 8e-12 Identities = 52/57 (91%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGG 2832 |||||||||||||||||| |||||||||||||||||||||| | ||||| | ||||| Sbjct 6763 TAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCACCGGTTCGATCCCGG 6707 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15847791560640