Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bursaphelenchus_20xylophilus_20[genbank_20GCA_5F000231135.1_202011- 10-13] 10,432 sequences; 73,085,728 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq5763 131 2e-24 seq6423 127 3e-23 seq7077 98.7 1e-14 seq4529 91.5 2e-12 seq4527 91.5 2e-12 >seq5763 Length=47425 Score = 131 bits (144), Expect = 2e-24 Identities = 169/232 (73%), Gaps = 6/232 (3%) Strand=Plus/Minus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 |||||| || ||||||||||| ||||| |||| ||| ||| |||| || Sbjct 14515 ATCTACCGTGTCCTCAAGCAGGTCCACCCTGACACCGGA-----ATC-TCCTCCAAGGCC 14462 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||||| ||||||||||| || |||||||| | |||| ||||||| | | || ||| | Sbjct 14461 ATGTCCATCATGAACTCCTTCGTCAACGATGTCTTCGAGCGCATCGCCGCTGAAGCCTCT 14402 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090 || ||||| | | ||||||| | ||| || | ||||| ||||| ||| |||| Sbjct 14401 CGTCTGGCCCAGTACAACAAGAGGTCCACAATTTCGTCCCGCGAAATCCAAACCTCCGTT 14342 Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || |||||| ||| || || ||||||| ||||||||||||||| || |||| Sbjct 14341 CGTCTGATCCTGCCAGGAGAGCTGGCCAAGCACGCCGTCTCCGAAGGAACCA 14290 >seq6423 Length=58865 Score = 127 bits (140), Expect = 3e-23 Identities = 168/232 (72%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 |||||| ||| | |||||||| |||||| || ||| |||||||| | || Sbjct 22028 ATCTACCGTGTGTTGAAGCAGGTCCACCCCGACAC---TGGAATCTCCTCCAA---GGCC 22081 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||| ||||||||||| || ||||||||| | |||| || |||| | |||||||| Sbjct 22082 ATGAGCATCATGAACTCTTTCGTCAACGACGTCTTCGAACGTATCGCCGCCGAGGCCTCC 22141 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090 || |||| | | ||||||||| ||| ||| | ||||| ||||||||| | || Sbjct 22142 CGATTGGCCCAATACAACAAGCGATCCACCATCTCGTCTCGCGAAATCCAGACCTCTGTC 22201 Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || |||||| ||| ||| || |||| | ||||||||||||||| || |||| Sbjct 22202 CGTCTGATCTTGCCCGGTGAGTTGGCAAAGCACGCCGTCTCCGAAGGAACCA 22253 >seq7077 Length=10159 Score = 98.7 bits (108), Expect = 1e-14 Identities = 107/137 (78%), Gaps = 4/137 (3%) Strand=Plus/Minus Query 1816126 CTCCATCGACTTGATGCACCGGCGCTGGATGTAGCCACGTC-CGGCGGTCTTGACGGCCG 1816184 |||||| | |||||| |||||||||||||||||| ||| ||||||| |||||||||| Sbjct 3419 CTCCATGGCCTTGATCAGCCGGCGCTGGATGTAGCCG-GTCTCGGCGGTTTTGACGGCCG 3361 Query 1816185 TGTCGACCAGGCCCTCGCGGCCGCCGATCATGTGCAAAAACATCTCGCGCGAG-TTGAGG 1816243 | |||| ||| ||||| || || || ||| ||| || || | |||| ||| | ||||| Sbjct 3360 TATCGATCAGTCCCTCACGTCCTCCCATCGCGTGGAAGAAGAACTCG-GCGGGCGTGAGG 3302 Query 1816244 CCGCGCTCGTACGAGTT 1816260 ||| | ||||||||| Sbjct 3301 CCGGCCAGGTACGAGTT 3285 >seq4529 Length=23528 Score = 91.5 bits (100), Expect = 2e-12 Identities = 161/232 (69%), Gaps = 6/232 (3%) Strand=Plus/Minus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 |||||| || ||||||||||| || ||| |||| | |||||||| || || Sbjct 15199 ATCTACCGTGTCCTCAAGCAGGTCCATCCCGACACCG---GAATCTCCTCCAA--AG-CC 15146 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||| ||||||||||| || ||||| || | |||| || || | | | || || Sbjct 15145 ATGAGCATCATGAACTCCTTCGTCAATGATGTCTTCGAACGTATTGCCGCTGAAGCTTCG 15086 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090 ||||| || | | |||||||||| || ||| | ||||| |||||||| | || Sbjct 15085 CGCCTCGCCCAATACAACAAGCGCTCGACCATCTCATCCCGCGAAATCCAGACTTCGGTC 15026 Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 |||||||| ||| ||| || |||| | |||||| || || || ||||||| Sbjct 15025 CGCCTGATTCTGCCCGGAGAGTTGGCTAAGCACGCTGTTTCTGAAGGCACCA 14974 >seq4527 Length=22061 Score = 91.5 bits (100), Expect = 2e-12 Identities = 161/232 (69%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 |||||| || ||||||||||| || ||| |||| | || || || || || Sbjct 2767 ATCTACCGTGTCCTCAAGCAGGTCCATCCCGACACCG---GAATCTCATCGAA--AG-CC 2820 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||| ||||||||||| || |||||||| | |||| || || | | | || || | Sbjct 2821 ATGAGCATCATGAACTCCTTCGTCAACGATGTCTTCGAACGTATTGCCGCTGAAGCGTCT 2880 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090 ||||| || | | |||||| ||| || ||| | ||||| |||||||| | || Sbjct 2881 CGCCTCGCCCAGTACAACAAACGCTCGACCATCTCATCCCGCGAAATCCAGACTTCGGTC 2940 Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 |||||||| ||| ||| || |||||| |||||| || || || ||||||| Sbjct 2941 CGCCTGATTCTGCCCGGAGAGTTGGCCAAGCACGCTGTTTCTGAAGGCACCA 2992 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7176805014425984