Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bursaphelenchus_20xylophilus_20[genbank_20GCA_5F000231135.1_202011- 10-13] 10,432 sequences; 73,085,728 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq8564 89.7 7e-13 >seq8564 Length=72546 Score = 89.7 bits (98), Expect = 7e-13 Identities = 113/155 (73%), Gaps = 3/155 (2%) Strand=Plus/Plus Query 39674 AGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAG 39733 ||||||||||||| |||||| || | |||||| |||| ||||||| || || ||| Sbjct 47165 AGTCCAGGCATTAAACCACGAGACTTCAACCAAAAGATGGAAGCAAAACTGCCCGAGAAG 47224 Query 39734 AAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCG---TAACTTGTATCATTA 39790 || ||||| || || || ||||| || || ||||| |||| || | | |||| | Sbjct 47225 AATATGCCCTCCACAGCAGCAAAAGCGACCAGTCTTGTTCCGAAAGAAGATCTCTCATCA 47284 Query 39791 TGTATCCACTTCTGTGCCCAATCAGCTTTCTTCTT 39825 ||||||||| |||||||| || |||||||| Sbjct 47285 GAGATCCACTTCATAGCCCAATCGGCCTTCTTCTT 47319 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686819227092480