Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bursaphelenchus_20xylophilus_20[genbank_20GCA_5F000231135.1_202011- 10-13] 10,432 sequences; 73,085,728 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq8192 122 7e-23 >seq8192 Length=16956 Score = 122 bits (134), Expect = 7e-23 Identities = 196/278 (71%), Gaps = 8/278 (3%) Strand=Plus/Plus Query 19336 AAACATGTTCGTGGACTTTTGCTTTATGGGCCACCGGGTTGTGGAAAAACATTAATTGCG 19395 |||||||| |||||| || | |||||||| || |||||| ||| ||||| || |||||| Sbjct 11172 AAACATGTCCGTGGAATTCTCCTTTATGGACCTCCGGGTACTGGTAAAACTTTGATTGCG 11231 Query 19396 AGAGAACTTAGTAAATTACTTA---CAAAACAACCTCCCAAAATTGTAAATGGTCCTGAA 19452 || | || | || | |||| | | | |||| ||| ||||| ||||| || || Sbjct 11232 AGGCAGATTGGAAAGATGCTTAATGCCAGAGAACC---CAAGATTGTCAATGGCCCCGAC 11288 Query 19453 ATCTTAAATAAATATGTAGGTCAATCGGAAGAAAATGT-ACGACGTTTGTTTGCTGACGC 19511 ||||||||||||||||| || |||| |||| ||| | | || | ||||||||||| || Sbjct 11289 ATCTTAAATAAATATGTCGGGGAATCTGAAGCTAATTTGAGGAAG-TTGTTTGCTGATGC 11347 Query 19512 TGAAGAAGAACAAAAACGTTTAGGGCGCAAAAGTTCTTTGCACATTATAATACTAGATGA 19571 ||| || ||| | | | | |||| ||| | | || || || ||| | || || Sbjct 11348 TGAGGAGGAATGGAGAAGAGTGGGGCACAACTCTGGCCTTCATATGATTATATTCGACGA 11407 Query 19572 ATTGGACGCAATCTGTAAGCAAAGAGGTTCTGGTGTAA 19609 | || || || || || |||||||| ||| ||||| Sbjct 11408 GATCGATGCCATTTGCAAACAAAGAGGGTCTAATGTAA 11445 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397405467444160