Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bursaphelenchus_20xylophilus_20[genbank_20GCA_5F000231135.1_202011- 10-13] 10,432 sequences; 73,085,728 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq6418 96.9 3e-15 >seq6418 Length=18488 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 6562 GTAGATATGCGCATCCCCCAACGTATGCACCAGCTCCCCAGGAACCAACCCCACGACATG 6621 |||||| || ||||| ||||| || ||||| | || |||| | | || ||||| Sbjct 10474 GTAGATGTGAGCATCGCCCAAAGTGTGCACGAATTCGCCAGCTTCGAGTCCACAAACATG 10533 Query 6622 AGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCCAT 6681 || ||||||| || | || || ||||| || || || || || || || | ||||| Sbjct 10534 GGCAATCATGTGGGTCAACAAAGAATAACTGGCGATATTAAAAGGAACACCCAGTCCCAT 10593 Query 6682 GTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAATTGGCA 6741 || || || |||||||| | ||||| || || ||||| || ||||||||||| Sbjct 10594 ATCACCGGAACGTTGATATAATTGGCAAGAAAGTCGACCATTTTGAACATAGAATTGGCA 10653 Query 6742 GAGGGTGTGGCACGGGGGGAGCGCCATCAGAGG 6774 || ||||| || || || | ||||||| |||| Sbjct 10654 AAGTGTGTGACATGGTGGTAACGCCATCTGAGG 10686 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 34571 CCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAATGGGGAG 34630 |||| ||||||| | || || || ||||| || ||||||||||| || ||||| Sbjct 10686 CCTCAGATGGCGTTACCACCATGTCACACACTTTGCCAATTCTATGTTCAAAATGGTCGA 10627 Query 34631 CTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATT 34690 || || ||||| | |||||||| || || || ||||| | || || || || || || Sbjct 10626 CTTTCTTGCCAATTATATCAACGTTCCGGTGATATGGGACTGGGTGTTCCTTTTAATATC 10567 Query 34691 GCTAGTTACGCTCTGCTCACGTACATGATCGCTCATGTCGTGGGGTTGGTTCCTGGGGAG 34750 || ||||| || || | || ||||||| || ||||| || | | |||| || Sbjct 10566 GCCAGTTATTCTTTGTTGACCCACATGATTGCCCATGTTTGTGGACTCGAAGCTGGCGAA 10507 Query 34751 CTGGTGCATACGTTGGGGGATGCGCATATCTAC 34783 | ||||| || ||||| ||||| || |||||| Sbjct 10506 TTCGTGCACACTTTGGGCGATGCTCACATCTAC 10474 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448203946583040