Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bursaphelenchus_20xylophilus_20[genbank_20GCA_5F000231135.1_202011- 10-13] 10,432 sequences; 73,085,728 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq6418 84.2 2e-11 >seq6418 Length=18488 Score = 84.2 bits (92), Expect = 2e-11 Identities = 143/202 (71%), Gaps = 4/202 (2%) Strand=Plus/Plus Query 27523 TGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTG-TC 27581 || ||||| || | ||||||| ||||| || |||| || | |||||| | ||| || Sbjct 10975 TGAAACCCATAAATTGGTCCCAAATCTCCTTCCTCCCGATGTTTGAAGCCA-TATTGATC 11033 Query 27582 CAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGA-GAGCTCTT 27640 |||||| |||| ||| || || || |||||||||||||| || || | || || || | Sbjct 11034 CAAAAACTCTCGGGATCCATTAGCATCCCAGATCTTTACTCCTTTGGCCGATAAGGTC-T 11092 Query 27641 TGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGA 27700 |||| || || ||||||| ||||||| || || || || | || ||||| | Sbjct 11093 TGGAATTGGTTTCACCTCTGATAAACCACAAAAGTTCTTCAACAATTGCTTTCCATGCCA 11152 Query 27701 CCCTCTTGGTCGTGAGGAGGGG 27722 | || ||||| || || || || Sbjct 11153 CTCTTTTGGTTGTCAGAAGAGG 11174 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369460220854592