Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bursaphelenchus_20xylophilus_20[genbank_20GCA_5F000231135.1_202011- 10-13] 10,432 sequences; 73,085,728 total letters Query= NC_031224.1 Length=59443 Score E Sequences producing significant alignments: (Bits) Value seq6418 93.3 2e-14 >seq6418 Length=18488 Score = 93.3 bits (102), Expect = 2e-14 Identities = 153/221 (69%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 52110 ATGGCGTTGGCTCCCTGCCATACACTATTCCAATTCTATGTAGCTGAAGGTAAGCTTTCG 52169 |||||||| | || || || ||||| | |||||||||||| | ||| ||||| Sbjct 10680 ATGGCGTTACCACCATGTCACACACTTTGCCAATTCTATGTTCAAAATGGTCGACTTTCT 10621 Query 52170 TGCCATTTGTATCAGCGGTCTGCCGACATGTTCTTGGGCGTTCCGTTTAACATTGCCAGC 52229 ||||| || ||||| || || | || ||| |||| ||||| ||||| || ||||| Sbjct 10620 TGCCAATTATATCAACGTTCCGGTGATATGGGACTGGGTGTTCCTTTTAATATCGCCAGT 10561 Query 52230 TATTCCTTGCTGACGCATCTGATTGCTCGAGCAGTTGGCCTTGATGTTGGTGAATTCATT 52289 ||||| ||| |||| || ||||||| | | ||| || || | ||| |||||| | Sbjct 10560 TATTCTTTGTTGACCCACATGATTGCCCATGTTTGTGGACTCGAAGCTGGCGAATTCGTG 10501 Query 52290 TGGACTGGTGGCGACGTCCATATCTACAACAACCATGTAGA 52330 ||| ||||| | || ||||||| || ||||| || Sbjct 10500 CACACTTTGGGCGATGCTCACATCTACAGTAATCATGTTGA 10460 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 190072450907520