Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bursaphelenchus_20xylophilus_20[genbank_20GCA_5F000231135.1_202011- 10-13] 10,432 sequences; 73,085,728 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq9793 132 1e-25 seq10254 95.1 3e-14 >seq9793 Length=2388 Score = 132 bits (146), Expect = 1e-25 Identities = 155/206 (75%), Gaps = 4/206 (2%) Strand=Plus/Plus Query 151901 ATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCT 151960 ||| || ||||| || || ||||||||||| |||| | ||| | |||||||| || Sbjct 1432 ATGGAGTGTAGATTCCTTCTGGATGTTGTAGTCGGAAAGAGTACGGCCATCTTCGAGTTG 1491 Query 151961 TTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTT 152020 ||| ||||||||||| | ||||| ||||| | | |||||||||||| ||||| || || Sbjct 1492 TTTTCCGGCGAAGATCAATCTCTGTTGGTCTGGTGGGATTCCTTCCTTGTCTTGGATCTT 1551 Query 152021 TTGTTTGACAGTCTCTACGCTGT--CTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCC 152078 | |||||| |||| | ||| ||| || || || |||||||| || || || || Sbjct 1552 TGCCTTGACATTCTCGATCGTGTCGCTG-GCT-TCAACCTCAAGAGTGATGGTCTTTCCA 1609 Query 152079 GTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||||||||||| |||||| Sbjct 1610 GTCAGGGTCTTCACGAAGATCTGCAT 1635 Score = 127 bits (140), Expect = 5e-24 Identities = 156/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 |||||| ||||| ||||| ||||| || ||||||||||| || | | ||| | ||||| Sbjct 967 GAGGACCAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGAGTGCGGCCATC 1026 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 ||| || ||| ||||||||||| || | |||||||| | | ||||||||||| || Sbjct 1027 TTCAAGTTGTTTTCCGGCGAAGATGAGACGTTGCTGGTCTGGGGGAATTCCTTCCTTGTC 1086 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 || || || || || |||| | | | || ||| ||| || || | || || || Sbjct 1087 CTGGATCTTGGCCTTCACGTTCTCGATGGTATCAGAAGCCTCGACCTCCAAGGTGATGGT 1146 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| ||||| ||||| ||||||| |||||| Sbjct 1147 CTTGCCAGTGAGGGTCTTAACGAAGATCTGCAT 1179 Score = 98.7 bits (108), Expect = 2e-15 Identities = 150/214 (70%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 |||||| | || || || ||||| |||||||||||||| || | | || | |||||| Sbjct 1195 GAGGACCAAGTGGAGGGTGGACTCCTTTTGGATGTTGTAGTCCGAGAGGGTGCGCCCATC 1254 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 ||| | ||| ||||||||||| | || ||||| || | | ||||||||| || || Sbjct 1255 TTCCAACTGTTTTCCGGCGAAGATCAATCTTTGCTGATCTGGGGGGATTCCTTCTTTGTC 1314 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 ||||| || || || |||| | |||| ||| || ||||| | || || || Sbjct 1315 CTGAATCTTGGCCTTCACGTTCTCGATCGTGTCCGAAGCTTCGACTTCCAATGTGATTGT 1374 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 || || || | || |||||||||| |||||| Sbjct 1375 CTTTCCAGTCAACGTTTTCACGAAGATTTGCATT 1408 >seq10254 Length=5829 Score = 95.1 bits (104), Expect = 3e-14 Identities = 153/218 (70%), Gaps = 4/218 (2%) Strand=Plus/Minus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 |||||| | || || || ||||| |||||||||||||| |||| | || | ||||| Sbjct 5261 GAGGACCAAGTGGAGGGTGGACTCCTTTTGGATGTTGTAGTCGGACAGGGTGCGACCATC 5202 Query 151952 TTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTT 152009 || || ||||| || |||||||| || | |||||||| | | || || ||||| Sbjct 5201 CTCCAGTTGCTTT--CCAGCGAAGATCAGACGTTGCTGGTCTGGGGGAATGCCCTCCTTG 5144 Query 152010 TCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATA 152069 ||||| || || ||| ||| |||| | | |||| | ||| || || | || || Sbjct 5143 TCTTGGATCTTGGCTTTCACATTCTCGATGGTGTCGCTTCCCTCCACCTCCAAGGTGATG 5084 Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 || ||||| || | |||||| ||||| | ||||| || Sbjct 5083 GTCTTGCCGGTCAAAGTCTTGACGAAAATTTGCATCTT 5046 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153666580311872