Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20angaria_20[genbank_20GCA_5F000165025.1_202010-10- 26] 33,559 sequences; 79,761,545 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq32786 87.8 1e-12 >seq32786 Length=16869 Score = 87.8 bits (96), Expect = 1e-12 Identities = 102/135 (76%), Gaps = 6/135 (4%) Strand=Plus/Minus Query 97357 AATTGATCAACGCCTTCTCCACCATAATTGTGCTTAAGACCTTG---ATATTCTGCTCCA 97413 ||||||||||| |||| ||| ||||||| || || ||| | ||||| |||||| Sbjct 7451 AATTGATCAACACCTTGTCCTTCATAATT-TG--TATGACAATCGATATATTTCGCTCCA 7395 Query 97414 AAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCTCTATCACAGAAA 97473 ||||| | |||||| || || ||||| ||||| | || |||||||||| |||| ||| Sbjct 7394 AAATGTCGCCATTGAAAACCGTAAACCGGTCCCAAATCGCCTTCTTCTCGATCAGTAAAA 7335 Query 97474 CCAAGCTTATCTAAA 97488 || || ||||| ||| Sbjct 7334 CCGAGTTTATCCAAA 7320 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346642165235630