Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20angaria_20[genbank_20GCA_5F000165025.1_202010-10- 26] 33,559 sequences; 79,761,545 total letters Query= NC_004680.1 Length=59471 Score E Sequences producing significant alignments: (Bits) Value seq17099 86.0 2e-12 >seq17099 Length=1510 Score = 86.0 bits (94), Expect = 2e-12 Identities = 125/175 (71%), Gaps = 4/175 (2%) Strand=Plus/Minus Query 42918 GCGTTGTGCTCCCAGGTCGATCCCGAGCTGTTCTTCCCCGAAAAGGGAGGA--AACGCGA 42975 ||| | ||| | ||| ||| ||||| |||||||||||| ||||| ||| || || Sbjct 518 GCGCTCTGCGCGCAGACCGACCCCGAAGCGTTCTTCCCCGAGAAGGGCGGATCGACCCGC 459 Query 42976 AACCCGCAAAGCGGATCTGCGGTATTTGCGACGTCCGGGACGAATGCCTTCAGTGGGCGC 43035 | || ||||| ||||||| | ||||| || || ||| ||||| | | |||| Sbjct 458 GA--GGCCAAGCGCATCTGCGAGAGCTGCGAAGTGCGCTCCGAGTGCCTCGACTACGCGC 401 Query 43036 TGGACAACAACGAACAGTTCGGCATCTTCGGCGGCCTGTCCGAGCGTGAACGCCG 43090 | | |||| |||| | |||||||||| ||||| || |||||||| ||||| || Sbjct 400 TCGCCAACGACGAGCGCTTCGGCATCTGGGGCGGGCTCTCCGAGCGCGAACGTCG 346 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 190109808542214