Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20angaria_20[genbank_20GCA_5F000165025.1_202010-10- 26] 33,559 sequences; 79,761,545 total letters Query= NC_004687.1 Length=156102 Score E Sequences producing significant alignments: (Bits) Value seq17206 96.9 3e-15 >seq17206 Length=1844 Score = 96.9 bits (106), Expect = 3e-15 Identities = 110/146 (75%), Gaps = 4/146 (3%) Strand=Plus/Minus Query 116616 GGCCCGGGCCGTGGCTCCGCCGGTGGCTCGCTGGTCACCTACGTCATGGGCATCACCTCG 116675 ||||| || |||||||| | || || || ||||| |||||| |||| |||||||| Sbjct 1073 GGCCCCGGTCGTGGCTCGGGCGCGGGATCCATGGTCGCCTACGCCATGCGCATCACCGAT 1014 Query 116676 ATCGACCCGATCAAGTACGACCTGATGTTCGAGCGCTTTATCAACCCGGACCGC--CCCG 116733 |||| ||| | || ||| || || |||||||| || ||||||| |||||| | || Sbjct 1013 CTCGATCCGCTGCAGCACGGACTCATCTTCGAGCGATTCCTCAACCCCGACCGCGTCTCG 954 Query 116734 ACTTCCCCGACATCGACGTCGACTTC 116759 | | |||||| |||||||||||||| Sbjct 953 A--TGCCCGACTTCGACGTCGACTTC 930 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499188908613680