Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20angaria_20[genbank_20GCA_5F000165025.1_202010-10- 26] 33,559 sequences; 79,761,545 total letters Query= NC_007967.1 Length=38194 Score E Sequences producing significant alignments: (Bits) Value seq19022 86.0 2e-12 >seq19022 Length=264 Score = 86.0 bits (94), Expect = 2e-12 Identities = 124/169 (73%), Gaps = 7/169 (4%) Strand=Plus/Minus Query 10072 TTCGACACCGAGACCACCGGCGTCGACGTCGAGTCCGACCGCATCGTCACC---GCCGCC 10128 ||||||||||||||||||||||| || || | || |||||||| ||| || | Sbjct 174 TTCGACACCGAGACCACCGGCGTGGAGACCGCGAGCGCACGCATCGTGACCTCGACCATC 115 Query 10129 GTGCTCCTGGTCGGCGGCGGCCAGCCCACCGAGACGC-ACACCTGGCTCGCCGACCCCGG 10187 | |||| | | | ||||||| || |||||| ||| || |||||| ||| || || Sbjct 114 GCGCTCGTCGGCCCCGGCGGCGAGGTGACCGAG-CGCTACGACTGGCTGATCGATCCGGG 56 Query 10188 GATCGACATCCCCGAGGCCG-CGAGCGCGGTGCACGGCGTCACCAGCGA 10235 |||| ||||||||| ||| || |||| ||||||||| ||| || ||| Sbjct 55 CGTCGAGATCCCCGAGCCCGCCGTGCGC-GTGCACGGCATCAGCACCGA 8 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 122050541866248