Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20angaria_20[genbank_20GCA_5F000165025.1_202010-10- 26] 33,559 sequences; 79,761,545 total letters Query= NC_008296.2 Length=177300 Score E Sequences producing significant alignments: (Bits) Value seq16951 82.4 9e-11 >seq16951 Length=1564 Score = 82.4 bits (90), Expect = 9e-11 Identities = 56/62 (90%), Gaps = 1/62 (2%) Strand=Plus/Plus Query 162265 TCAGTAGCTCAGCTGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCACAGGTTCGAATCC 162324 || ||||||||| ||||||||||||| ||||||||| | ||||||| ||||||||||||| Sbjct 78 TCCGTAGCTCAG-TGGATAGAGCAACGGCCTTCTAATCCGTCGGTCGCAGGTTCGAATCC 136 Query 162325 TG 162326 || Sbjct 137 TG 138 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 566994053266400