Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20angaria_20[genbank_20GCA_5F000165025.1_202010-10- 26] 33,559 sequences; 79,761,545 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq32853 394 7e-104 seq16010 145 6e-29 seq32235 143 2e-28 seq13386 140 3e-27 seq29836 120 2e-21 seq32841 116 3e-20 seq30276 109 4e-18 seq31637 107 2e-17 seq30935 107 2e-17 >seq32853 Length=35789 Score = 394 bits (436), Expect = 7e-104 Identities = 581/817 (71%), Gaps = 8/817 (1%) Strand=Plus/Plus Query 551789 TGGAGATTCTCATCTTGGTGGCGAAGATTTTGATAATAGACTGGTATCATGGTGTGTTGA 551848 ||| ||| | ||| | || || |||||||||||| | ||| | | ||| | | ||| Sbjct 17340 TGGTGATACACATTTAGGAGGAGAAGATTTTGATCAAAGAATTCT-TCAACATTTTATGA 17398 Query 551849 A-GATTTTAAACGAAAAAAC---AAAGTTGATCTATCTACATCTGCCAAAGCTCTTCGTC 551904 || |||||| ||||| | |||| | || ||| | ||| | | ||| |||| Sbjct 17399 GTGAATTTAAAAGAAAACATGGAAAAGATATTCAATCAA-ATC--CAAGAGCAATTCGAA 17455 Query 551905 GTCTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTA 551964 | |||||||||| || |||||||| ||| || | | ||| | | || | | | Sbjct 17456 GATTAAGAACTGCATGTGAAAGAGCAAAAAGAACATTATCAAGTTCATCGGAAGCGATTG 17515 Query 551965 TTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAAT 552024 ||||||| |||||| | ||||| |||||||||| | || ||| | | || | || Sbjct 17516 TTGAAGTTGATTCACTTTTTGAAGGAATTGATTTATGTTCGAGAATTACACGTGCAAGAT 17575 Query 552025 TTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAA 552084 ||||||| | ||| ||||| | || |||||||| | |||||||| ||| ||| || | Sbjct 17576 TTGAAGAATTGTGTGCTGATTTATTCCGAAAAACATTGGAACCAGTTGAAAAAGCATTGA 17635 Query 552085 GAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAA 552144 ||||| |||| | |||||||| ||| | ||||| |||| | ||||| ||||| |||| Sbjct 17636 GAGATGCAAAATTGGATAAATCAAAAATCGATGAAGTTGTTTTGGTTGGAGGATCAACAA 17695 Query 552145 GAATTCCTAAAATTCGCGAAATGTTAAGTTCTTATTTCAATGGTAAAAAATTAAATGAAA 552204 || |||| ||||||| ||||||| | || |||||||| ||| |||| ||| Sbjct 17696 GAGTTCCAAAAATTCAAAAAATGTTGAAAGATTTCTTCAATGGAAAAGAATTGAATTGTT 17755 Query 552205 GTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTG 552264 | ||||||||||| |||||||| |||||||| || ||||||| || |||||||||| Sbjct 17756 CAATCAATCCAGATGAAGCTGTTGCTTATGGTGCTGCTGTTCAAGCTGCAATTCTTTCTG 17815 Query 552265 GACAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTTG 552324 || | ||||| | | | || || || | || |||||| ||||| | ||||| Sbjct 17816 GAATTAAAGATGATTCAATCAAGGATGTTTTATTGGTTGATGTTGCTCCTTTGAGTCTTG 17875 Query 552325 GTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCTT 552384 | | ||||| | ||| || ||||||| ||| | || ||| |||||||| ||||| Sbjct 17876 GAATTGAAACTGCTGGTGGAGTTATGACAAATTTGATTGATCGAAATACTCGAATTCCAA 17935 Query 552385 GTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAA 552444 ||| ||| ||||| || ||| | ||||||||| | | |||| |||||||| Sbjct 17936 CAAAAGCATCAAAAACCTTTTCAACATATGCTGATAATCAACCAGGTGTTTCAATTCAAG 17995 Query 552445 TTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTAG 552504 | |||||||| |||||| | | || ||||||||| ||||| | || || ||| | ||| Sbjct 17996 TATTTGAAGGTGAAAGAGCAATGACAAAAGATAATCATCAATTGGGAACATTTGAATTAT 18055 Query 552505 AAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATG 552564 || ||||| || ||||| | || || || ||||||||||| || || ||||| |||| Sbjct 18056 GTGGAATTCCACCAGCTCCAAGAGGTGTTCCACAAATTGAAGTAACATTTGATATTGATG 18115 Query 552565 CCAATGGAATTTTGAATGTGACTGCTTGTGATAAATC 552601 | |||||||| |||||||| || |||||||||||||| Sbjct 18116 CAAATGGAATATTGAATGTAACAGCTTGTGATAAATC 18152 Score = 228 bits (252), Expect = 7e-54 Identities = 381/542 (70%), Gaps = 19/542 (4%) Strand=Plus/Plus Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111 || ||||| |||||||| | |||| |||| || || ||||| |||||| | |||| Sbjct 15781 GTCGAAATACTTGCCAATTCTGAAGGAAACAAGACAACACCATCATATGTTGCATTCAGT 15840 Query 550112 GAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAAT 550171 ||||||||| || ||||| ||||| |||||| ||||||| || | ||||| ||| Sbjct 15841 GAAACTGAAAGATTGGTTGGAGATGCGGCAAAAGATCAAGCAGCTCGAAATCCGGAAAAT 15900 Query 550172 ACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCA 550231 || |||||||||| ||||| || ||||| ||| || |||||||| ||||| Sbjct 15901 ACAGTTTTTGATGCGAAACGATTGATTGGTCGAAAATTCGCAGATTCGACAGTTCAACAG 15960 Query 550232 GATATGAAGCATTGGCC-TTTCCAA---ATTGTTAATGTTTCTGGAAAACCTTATATTGA 550287 |||||||| |||| || ||| ||| | | || | |||||||| ||||| Sbjct 15961 GATATGAAACATTTTCCATTTGCAATCAAATCAAAAAAT----GGAAAACCAGTAATTGA 16016 Query 550288 AGCTACTCATGAA-GGATCTGTTAAACAATT-TTCA--CCAGAACAAATTTCATCTATGG 550343 || | ||||| ||| | |||| | |||| |||||| |||| ||| | |||| Sbjct 16017 AGTTGAA-ATGAAAGGA---GAAAAACGAGAATTCAATCCAGAAGAAATATCAGCAATGG 16072 Query 550344 TTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAG 550403 | | ||||||||| ||||||| | | | | || || || | | ||||| | Sbjct 16073 TACTTGGAAAAATGAAAGAAACAGCTGAAACATATTTGGGACATCAAATAAAAGATGCTG 16132 Query 550404 TAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGAC 550463 | || ||||||||||||||||||||||| |||||| | ||||| || |||||||| | | Sbjct 16133 TTATTACTGTACCAGCATATTTTAATGATTCACAAAGACAAGCAACAAAAGATGCAGCAA 16192 Query 550464 GTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCAT 550523 ||||| || | |||| |||| ||||| |||||||| ||||| |||||| | |||| Sbjct 16193 CAATTGCGGGTTTAAATGCAATTCGAATTATAAATGAACCAACTGCAGCTGCATTAGCAT 16252 Query 550524 ATGGACTTGATAAACAT---AATGATCAAGAACTTAATGTACTCATCTTTGATTGTGGAG 550580 ||||| | || || || || ||| | || |||||| | |||||||||| || | Sbjct 16253 ATGGATTAGACAAGAATATCAAAGATGATGAGAAAAATGTATTGATCTTTGATTTGGGTG 16312 Query 550581 GT 550582 || Sbjct 16313 GT 16314 Score = 221 bits (244), Expect = 1e-51 Identities = 329/462 (71%), Gaps = 10/462 (2%) Strand=Plus/Plus Query 552115 ATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTCCTAAAATTCGCGAAATGTTAAGTT 552174 ||||| |||| | ||||| ||||| |||||| |||| || |||| ||||||| | Sbjct 16805 ATGAAGTTGTTTTGGTTGGAGGATCAACAAGAGTTCCAAAGATTCAGAAAATGTTGAAAG 16864 Query 552175 CTTATTTCAATGGTAAAAAATTAAA-TGA--AAGTGTTAATCCAGATGAGGCTGTTGCCT 552231 || ||||| || || |||| || || || | ||||||||||| |||||||| | Sbjct 16865 ATTTCTTCAACGGAAAGGAATTGAACTGCTCAA---TCAATCCAGATGAAGCTGTTGCTT 16921 Query 552232 ATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGA--CAAACTGATGAAAAACTACAAAA 552289 ||||||| || ||||||| || |||||||||||| |||| ||||| | | | | Sbjct 16922 ATGGTGCTGCTGTTCAAGCTGCAATTCTTTCTGGAATCAAA--GATGATTCAATCAAGGA 16979 Query 552290 TATTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTAT 552349 | || | | || |||||| |||| | ||| || | ||||| | ||| || |||| Sbjct 16980 TGTTTTGTTGGTTGATGTTGCTCCATTGAGTCTCGGAATCGAAACTGCTGGTGGAGTTAT 17039 Query 552350 GACTAATCTTATCGATAGAAATACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTAC 552409 ||| ||| | ||||| |||| || | ||||| ||| ||| ||| || || Sbjct 17040 GACAAATTTGATCGAACGAAACACAAGAATTCCAACAAAAGCATCAAAAACATTCTCAAC 17099 Query 552410 GTATTCAGATAATCAAACTGCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCAC 552469 ||| | ||||||||| | | ||| |||||||| | || ||||| |||||| | | || Sbjct 17100 ATATGCTGATAATCAACCAGGTGTATCAATTCAAGTATTCGAAGGTGAAAGAGCAATGAC 17159 Query 552470 TAAAGATAATAATCAACTTGGTACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGG 552529 || |||||| ||||| | || || ||| | ||| || ||||| |||||||| | || Sbjct 17160 AAAGGATAATCATCAATTGGGAACATTTGAATTATCTGGAATTCCACCTGCTCCAAGAGG 17219 Query 552530 AGTACCGCAAATTGAAGTTACTTTCGATATCGATGCCAATGG 552571 || || ||||||||||||||||| ||||||||||| ||||| Sbjct 17220 TGTTCCACAAATTGAAGTTACTTTTGATATCGATGCAAATGG 17261 Score = 127 bits (140), Expect = 2e-23 Identities = 137/181 (76%), Gaps = 3/181 (2%) Strand=Plus/Plus Query 550397 GATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGAT 550456 ||||| || || ||||| ||||||||||| ||||| |||||| | ||||| || |||||| Sbjct 35397 GATGCTGTTATTACTGTGCCAGCATATTTCAATGATTCACAAAGACAAGCAACAAAAGAT 35456 Query 550457 GCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCA 550516 || | | |||||||| | |||| |||| |||||||||||||| ||||| |||||| Sbjct 35457 GCAGCAACGATTGCTGGTTTGAATGCAATTCGAATTATCAATGAACCAACTGCGGCTGCA 35516 Query 550517 CTTGCATATGGACTTGATAAACAT---AATGATCAAGAACTTAATGTACTCATCTTTGAT 550573 | || |||||| | || || || || ||| | || |||||| | ||||||||| Sbjct 35517 TTAGCTTATGGATTGGACAAGAATATCAAAGATGATGAGAAAAATGTATTGATCTTTGAT 35576 Query 550574 T 550574 | Sbjct 35577 T 35577 Score = 118 bits (130), Expect = 9e-21 Identities = 136/183 (74%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 550062 TTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACTGAAC 550121 |||||||| | |||| |||| || || ||||| |||||| | |||| ||||||||| Sbjct 169 TTGCCAATTCTGAAGGAAACAAGACAACACCATCATATGTTGCATTCAGTGAAACTGAAA 228 Query 550122 ATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATACTATTTTTG 550181 |||||||| |||||||||||| ||||||| || | ||||| ||||| |||||| Sbjct 229 GATTAGTTGGAGATGCAGCAAAAGATCAAGCTGCTAGAAATCCAGAAAATACAGTTTTTG 288 Query 550182 ATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGATATGAAGC 550241 |||| ||| | || ||||| ||| || ||||| || ||||| |||||||| | Sbjct 289 ATGCAAAAAGATTGATTGGTCGAAAATTCGCAGATTCAACAGTTCAACAGGATATGAAAC 348 Query 550242 ATT 550244 ||| Sbjct 349 ATT 351 Score = 105 bits (116), Expect = 5e-17 Identities = 100/128 (78%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 361706 CCATAAGCTAATGAAGCAGCTGTTGGTTCGTTAATTATTTTAATAACATTGAGTCCCGCT 361765 ||||| ||||||| ||| || |||||||| || || ||| ||| |||| | ||||| Sbjct 16256 CCATATGCTAATGCAGCTGCAGTTGGTTCATTTATAATTCGAATTGCATTTAAACCCGCA 16197 Query 361766 ATTTTTGATGCATCTAAAGTGGCTTGACGTTGTGCATCATTAAAATATGCAGGAACAGTA 361825 ||| ||| ||||||| || ||||| | ||||| ||||||||||||||| || |||||| Sbjct 16196 ATTGTTGCTGCATCTTTTGTTGCTTGTCTTTGTGAATCATTAAAATATGCTGGTACAGTA 16137 Query 361826 ATCACTGC 361833 || || || Sbjct 16136 ATAACAGC 16129 Score = 96.9 bits (106), Expect = 3e-14 Identities = 98/128 (77%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 361706 CCATAAGCTAATGAAGCAGCTGTTGGTTCGTTAATTATTTTAATAACATTGAGTCCCGCT 361765 ||||||||||||| ||| || |||||||| || || ||| ||| |||| | || || Sbjct 35527 CCATAAGCTAATGCAGCCGCAGTTGGTTCATTGATAATTCGAATTGCATTCAAACCAGCA 35468 Query 361766 ATTTTTGATGCATCTAAAGTGGCTTGACGTTGTGCATCATTAAAATATGCAGGAACAGTA 361825 || ||| ||||||| || ||||| | ||||| |||||| |||||||| || |||||| Sbjct 35467 ATCGTTGCTGCATCTTTTGTTGCTTGTCTTTGTGAATCATTGAAATATGCTGGCACAGTA 35408 Query 361826 ATCACTGC 361833 || || || Sbjct 35407 ATAACAGC 35400 >seq16010 Length=816 Score = 145 bits (160), Expect = 6e-29 Identities = 170/225 (76%), Gaps = 6/225 (3%) Strand=Plus/Plus Query 563254 CTGAGACGGAGTACAAGATGAAGGGTACTTTC--TTTGGTAATATTGTAATCAGCTAGAG 563311 |||||||| || || | ||| || || ||| ||||| || |||||||||| |||| Sbjct 144 CTGAGACGAAGAACCAAATGGAGTGTTGATTCCTTTTGG--ATGTTGTAATCAGAAAGAG 201 Query 563312 TTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTC 563371 ||||| |||||| | |||||||||||||||||| | |||||| |||| || || |||| Sbjct 202 TTCTTCCATCTTCCAATTGTTTTCCGGCAAAAATCAATCTTTGTTGATGTGGTGGGATTC 261 Query 563372 CTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAG-TGTGAGTACATTCG 563430 |||| ||||||||||||||| ||| || |||||||| || | | || |||| Sbjct 262 CTTCGTTATCTTGAATTTTTGCTTTGACATTTTCAATTGTGTCGGAAGCTTCGAC-TTCG 320 Query 563431 AGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 || || | |||||| ||||| | ||||| |||| ||||||||| Sbjct 321 AGTGTGATAGTTTTTCCAGTCAATGTTTTGACGACGATTTGCATA 365 >seq32235 Length=18694 Score = 143 bits (158), Expect = 2e-28 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 550310 AAACAATTTTCACCAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCC 550369 |||||||| || |||||| || | ||| | |||||| | || ||||| |||| ||| Sbjct 1735 AAACAATTCTCTCCAGAAGAAGTGTCAGCGATGGTTCTTTCAAAGATGAAGCAAATTGCC 1794 Query 550370 AGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAAT 550429 ||| |||| || || || | | ||||| | ||||| ||||||||||| || Sbjct 1795 GAATCTTACCTTGGCCACGAGGTGAAAAACGCAGTCGTCACTGTTCCAGCATATTTCAAC 1854 Query 550430 GACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGT 550489 || | ||| | ||||| ||||| ||||||||| |||||||| || |||||| |||| Sbjct 1855 GATGCTCAAAGACAAGCGACTAAGGATGCTGGAACAATTGCTGGTCTCAATGTTGTTCGA 1914 Query 550490 ATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTTGATAA 550536 || ||||| ||||| |||||||| ||| |||| ||||| ||||| || Sbjct 1915 ATCATCAACGAACCAACTGCTGCCGCAATTGCCTATGGTCTTGACAA 1961 Score = 131 bits (144), Expect = 1e-24 Identities = 255/374 (68%), Gaps = 6/374 (2%) Strand=Plus/Plus Query 552210 AATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGACAA 552269 ||||||||||| ||||||||||||||||| || |||||| || | || | |||| | Sbjct 2709 AATCCAGATGAAGCTGTTGCCTATGGTGCTGCGGTTCAAGGAGGTGTTAT---TGGAGGA 2765 Query 552270 ACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTTTA 552329 |||| || || | || |||| ||| | ||||| | ||| || |||||||| | Sbjct 2766 GTTGAT--AATAC-CGGAGATGTTGTTCTTCTTGATGTCAATCCACTCACTCTTGGTATC 2822 Query 552330 GAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCTTGTAAA 552389 ||||| |||||||| | ||||| || | ||| ||||| ||| || || ||| Sbjct 2823 GAAACTGTTGGAGGAGTCATGACCAAATTGATCACCAGAAACACTGTCATCCCAACCAAA 2882 Query 552390 AAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAATTTTT 552449 || || || || || || | | ||||| |||| |||||||| ||| ||| Sbjct 2883 AAGAGTCAAGTCTTCTCGACTGCTGCCGATAACCAAAAAGCTGTTACCATTGTTGTTTAC 2942 Query 552450 GAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTAGAAGGT 552509 ||||||||| | | | ||||| ||| ||||| | || | ||| || | || Sbjct 2943 GAAGGAGAACGGCCAATGGTCAAAGACAATCATCAATTGGGAAGCTTTGATCTCACTGGA 3002 Query 552510 ATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGCCAAT 552569 ||||| || ||||| || ||| ||| |||||||| ||||| || || || |||| | Sbjct 3003 ATTCCACCAGCTCCACGCGGAACACCACAAATTGAGGTTACCTTTGAAATTGATGTTAGC 3062 Query 552570 GGAATTTTGAATGT 552583 || ||| || |||| Sbjct 3063 GGTATTCTGCATGT 3076 Score = 113 bits (124), Expect = 4e-19 Identities = 155/217 (71%), Gaps = 6/217 (3%) Strand=Plus/Plus Query 549994 TATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGT 550053 ||| ||||| ||||| ||||| || ||| |||||||| |||| ||||||| | ||| Sbjct 1186 TATTGGTATTGATTTGGGAACAACGTATTCATGTGTTGGAGTTTTCAAAAATGGAAGAGT 1245 Query 550054 TGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGG- 550112 |||||| || |||||||| ||||| || | | || ||||||||||| ||||||| | Sbjct 1246 TGAAATCATCGCCAATGACCAAGGAAATCGTATCACACCATCTTATGTCGCTTTCACTGG 1305 Query 550113 -----AAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTAC 550167 || |||| || |||||||||| || || ||||| ||| ||||| Sbjct 1306 TGAACAAGGAGAACGATTGATTGGTGATGCCGCCAAGAATCAATTGACTATCAATCCAGA 1365 Query 550168 CAATACTATTTTTGATGCTAAACGTTTAATTGGAAGA 550204 || || |||||||| |||||||| |||||||| Sbjct 1366 AAACACAATTTTTGACATCAAACGTTTGGTTGGAAGA 1402 Score = 111 bits (122), Expect = 1e-18 Identities = 205/302 (68%), Gaps = 13/302 (4%) Strand=Plus/Minus Query 361546 ATCTATATCTTCACCACCTAAATGTGTACTACCGCTAACTGCTAATGTTCTAAATAAGCC 361605 ||| | |||||| || || ||||| ||| || | ||| ||| | |||| || Sbjct 2100 ATCGAAATCTTCTCCTCCCAAATGAGTATCTCCATTCGTTGCCAATACTTCGAATACTCC 2041 Query 361606 ATTATTAATATTCATGAGACAAACATCGAGTGTTCCTGCACCTAAATCATATATGATAAT 361665 ||||| ||| | | ||| ||||||||| || || | || ||||| | | | ||| Sbjct 2040 ATTATCAATTGTAAGAAGAGAAACATCGAAAGTACCACCTCCCAAATCGAAAACAAGAAT 1981 Query 361666 ATTCCCCCCGTTTTTATTTTTCCAAGTTTTACTTCCAAGACCATAAGCTAATGAAGCAGC 361725 ||| | ||| || | ||| | |||||||||| || | || ||||| Sbjct 1980 ATTTC------------TTTCCCCATCTTTCTTGTCAAGACCATAGGCAATTGCGGCAGC 1933 Query 361726 TGTTGGTTCGTTAATTATTTTAATAACATTGAGTCCCGCTATTTTTGATGCATCTAAAGT 361785 ||||||||||| || ||| || ||||||||| || || ||| || ||||| ||| Sbjct 1932 AGTTGGTTCGTTGATGATTCGAACAACATTGAGACCAGCAATTGTTCCAGCATCCTTAGT 1873 Query 361786 GGCTTGACGTTGTGCATCATTAAAATATGCAGGAACAGTAATCACTGC-TTTTTCAACTT 361844 ||||| | ||| ||||| || |||||||| |||||||| | ||||| ||||||| || Sbjct 1872 CGCTTGTCTTTGAGCATCGTTGAAATATGCTGGAACAGTGACGACTGCGTTTTTCACCTC 1813 Query 361845 GT 361846 || Sbjct 1812 GT 1811 >seq13386 Length=19191 Score = 140 bits (154), Expect = 3e-27 Identities = 170/227 (75%), Gaps = 10/227 (4%) Strand=Plus/Plus Query 563254 CTGAGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAG 563311 |||||||| || || | || ||||| ||| | ||||| || ||||| || | |||| Sbjct 13526 CTGAGACGAAGGACCAAGTGGAGGGTGGACTCTTTTTGG--ATGTTGTAGTCGGAGAGAG 13583 Query 563312 TTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTC 563371 ||||| |||||| | |||||||||||||||||| | |||||| || || || ||||||| Sbjct 13584 TTCTTCCATCTTCCAATTGTTTTCCGGCAAAAATCAATCTTTGTTGGTCTGGTGGAATTC 13643 Query 563372 CTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATC---AGTGTGAGTACATT 563428 |||||||||||||||||||| ||| || |||||||| || || | | || || Sbjct 13644 CTTCTTTATCTTGAATTTTTGCTTTGACATTTTCAATTGTGTCCGAAGCTTCA--AC-TT 13700 Query 563429 CGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 | | || | ||||| ||||| | ||||| || || ||||||||| Sbjct 13701 CCAATGTGATGGTTTTTCCAGTCAATGTTTTGACAAAGATTTGCATA 13747 Score = 109 bits (120), Expect = 4e-18 Identities = 161/223 (72%), Gaps = 10/223 (4%) Strand=Plus/Plus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTC--TTTGGTAATATTGTAATCAGCTAGAGTTC 563314 |||||||| || | ||||||||| ||| ||||| || |||||||||| | || | Sbjct 13757 AGACGGAGAACCAAGTGAAGGGTAGATTCCTTTTGG--ATGTTGTAATCAGACAATGTGC 13814 Query 563315 TTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTT 563374 | |||||| | |||||||||||||||||| || | ||| ||||| || || ||||||| Sbjct 13815 GTCCATCTTCCAATTGTTTTCCGGCAAAAATGAGACGTTGTTGATCTGGTGGGATTCCTT 13874 Query 563375 CTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAG-TACA--TTCGA 563431 | || ||||| || || ||| || || || || |||| || | || ||| | Sbjct 13875 CCTTGTCTTGGATCTTAGCTTTGACATTTTCGATGGTGTCAG---AAGCTTCAACTTCAA 13931 Query 563432 GAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 | || | ||||| ||||| || || || ||||| |||||||| Sbjct 13932 GTGTGATTGTTTTTCCAGTGAGTGTCTTGACGAAGATTTGCAT 13974 Score = 104 bits (114), Expect = 2e-16 Identities = 156/222 (70%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 563254 CTGAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTT 563313 |||||||| || || | || || || |||||| ||| ||||| || | || ||| Sbjct 12205 CTGAGACGAAGAACCAAGTGGAGTGTTGATTCTTTTTGAATGTTGTAGTCGGAGAGGGTT 12264 Query 563314 CTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCT 563373 ||| ||||| | |||||||||||| || || | |||||| || || || || |||||| Sbjct 12265 CTTCCGTCTTCCAATTGTTTTCCGGCGAAGATCAATCTTTGTTGGTCTGGTGGGATTCCT 12324 Query 563374 TCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGA 563433 ||||| ||||||||||| ||| || || || ||||||| | ||| || Sbjct 12325 TCTTTGTCTTGAATTTTAGCTTTGACATTTTCGATGGTATCAGAAGCCTCAACTTCAAGG 12384 Query 563434 GTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 || | || || || || | |||||| || || ||||||||| Sbjct 12385 GTGATGGTCTTTCCGGTCAAAGTTTTGACAAAGATTTGCATA 12426 Score = 100 bits (110), Expect = 2e-15 Identities = 150/209 (72%), Gaps = 3/209 (1%) Strand=Plus/Plus Query 563267 CAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAA 563326 |||| ||||| || |||||| || ||||| || | || |||||| |||||| | Sbjct 13996 CAAG-TGAAGTGTTGATTCTTTTTGGATGTTGTAGTCGGAGAGGGTTCTTCCATCTTCCA 14054 Query 563327 GTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAA 563386 |||||||||||| || || | |||||| || || || ||||||||||| || ||||| | Sbjct 14055 ATTGTTTTCCGGCGAAGATCAATCTTTGTTGGTCTGGTGGAATTCCTTCCTTGTCTTGGA 14114 Query 563387 TTTTTTGTTTTACTGCCTCAATTGTATCAG-TGTGAGTACATTCGAGAGTAACAGTTTTA 563445 | || || || |||||| ||||||| | || ||| | ||| | ||||| Sbjct 14115 TCTTGGCCTTGACGTTCTCAATGGTATCAGAAGCTTCGAC-TTCCAAAGTGATGGTTTTT 14173 Query 563446 CCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 ||||| | |||||| || || |||||||| Sbjct 14174 CCAGTCAAAGTTTTGACAAAGATTTGCAT 14202 Score = 98.7 bits (108), Expect = 8e-15 Identities = 141/195 (72%), Gaps = 3/195 (2%) Strand=Plus/Plus Query 563282 TTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAA 563341 || |||| | |||||| ||||| | || ||||| |||||| | |||||||||||| | Sbjct 13046 TTCCTTTTG-AATATTATAATCCGAAAGGGTTCTGCCATCTTCCAATTGTTTTCCGGCGA 13104 Query 563342 AAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTG 563401 | || | |||||| || || || |||||||||||||| ||||| || || || || Sbjct 13105 AGATCAATCTTTGTTGGTCTGGTGGAATTCCTTCTTTGTCTTGGATCTTGGCCTTGACAT 13164 Query 563402 CCTCAATTGTATCAG-TGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTA 563460 ||||| || |||| | || ||| | || | |||||| || || || || || Sbjct 13165 TTTCAATGGTGTCAGAAGCTTCGAC-TTCCAAGGTGATAGTTTTGCCGGTGAGGGTCTTG 13223 Query 563461 ACGAAAATTTGCATA 563475 ||||||||||||||| Sbjct 13224 ACGAAAATTTGCATA 13238 >seq29836 Length=6592 Score = 120 bits (132), Expect = 2e-21 Identities = 113/143 (79%), Gaps = 1/143 (1%) Strand=Plus/Minus Query 550409 ACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATT 550468 || || ||||| || || |||||||||||||||||||| || || |||||||||| ||| Sbjct 3119 ACAGTCCCAGCTTACTTCAATGACTCACAACGTCAAGCAACCAAGGATGCTGGACAAATT 3060 Query 550469 GCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGA 550528 || || | |||||||||||| ||||||| || || || |||||||| ||||| || || Sbjct 3059 GCCGGTTTGAATGTTCTTCGTGTTATCAACGAGCCAACCGCTGCTGCTCTTGCCTACGGT 3000 Query 550529 CTTGATAAACATAATGATCAAGA 550551 | || ||| | ||||| |||| Sbjct 2999 TTGGAGAAATCTGATGAT-AAGA 2978 >seq32841 Length=39501 Score = 116 bits (128), Expect = 3e-20 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 550310 AAACAATTTTCACCAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCC 550369 |||||||| |||||| || |||| |||||||| | | || ||||| ||| ||| Sbjct 37396 AAACAATTCAGCCCAGAAGAAGTTTCCGCTATGGTTCTCGTCAAGATGAAGGAAATCGCC 37455 Query 550370 AGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAAT 550429 | | | || | ||||| | | | || || | ||||| ||||| || || || Sbjct 37456 GAATCATACCTCGGAAAGGAAGTCAAGAACGCCGTCGTCACTGTTCCAGCCTACTTCAAC 37515 Query 550430 GACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGT 550489 ||| | |||||||||||||| || ||||| ||| || |||||| | |||||| ||||| Sbjct 37516 GACGCTCAACGTCAAGCTACCAAGGATGCCGGAACCATCGCTGGATTGAATGTTGTTCGT 37575 Query 550490 ATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTTGATAA 550536 || ||||| || || |||||||| || | || || |||||||| || Sbjct 37576 ATCATCAACGAGCCAACTGCTGCCGCTATCGCCTACGGACTTGACAA 37622 Score = 95.1 bits (104), Expect = 1e-13 Identities = 133/187 (71%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 550396 GGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGA 550455 ||| || || | ||||| ||||| || || || ||||| ||||||||||| || || || Sbjct 19306 GGACGCTGTTGTCACTGTCCCAGCCTACTTCAACGACTCTCAACGTCAAGCCACCAAGGA 19365 Query 550456 TGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGC 550515 ||| ||| ||| ||||||| || || || ||||| ||||| ||||| || || ||||| Sbjct 19366 TGCCGGAGCTATCTCTGGACTCAACGTCCTCCGTATCATCAACGAACCAACCGCCGCTGC 19425 Query 550516 ACTTGCATATGGACTTGATAAACATAATGATCAAGAACTTAATGTACTCATCTTTGATTG 550575 | || || || | || || | | | ||||| || || || ||||| ||| Sbjct 19426 TATCGCTTACGGTTTGGACAAGAAGGGAGCTGGAGAACGCAACGTTCTTATCTTCGATCT 19485 Query 550576 TGGAGGT 550582 ||||||| Sbjct 19486 TGGAGGT 19492 Score = 87.8 bits (96), Expect = 1e-11 Identities = 180/265 (68%), Gaps = 6/265 (2%) Strand=Plus/Plus Query 549994 TATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGT 550053 ||| ||||| ||||| ||||| || ||| ||||| || |||| | ||||| || Sbjct 37020 TATTGGTATCGATTTGGGAACAACTTATTCATGTGTCGGAGTTTTCAAGAATGGACGTGT 37079 Query 550054 TGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCAC-GG 550112 |||||||||||||| |||||||| ||| | | || ||||| |||||| | ||| | || Sbjct 37080 CGAAATTATTGCCAACGATCAAGGAAACCGTATCACACCATCATATGTTGCCTTCTCTGG 37139 Query 550113 A-AAC----TGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTAC 550167 | ||| |||| || | || ||||| || || |||| ||| || || Sbjct 37140 AGAACAAGGAGAACGATTGATCGGAGATGCTGCCAAGAATCAGCTCACCATCAACCCAGA 37199 Query 550168 CAATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCA 550227 || || || || || || || | || || |||||| || ||||| ||||||||| Sbjct 37200 AAACACCATCTTCGACGCCAAGAGATTGATCGGAAGAGATTACAATGACAAGACTGTTCA 37259 Query 550228 GGCAGATATGAAGCATTGGCCTTTC 550252 || ||| | || | ||||| ||| Sbjct 37260 AGCTGATGTCAAACTCTGGCCATTC 37284 >seq30276 Length=15381 Score = 109 bits (120), Expect = 4e-18 Identities = 255/378 (67%), Gaps = 10/378 (3%) Strand=Plus/Plus Query 368735 TTGATCACATTAAAATTCCATCAAAGAAAGGAAAAGGTTTATTGTCTCGAGTTGAAGGAG 368794 ||||| | || | ||| || ||||| |||||||| | | || ||| | || Sbjct 14327 TTGATAATATCACAATCCCTTCAAAATCTGGAAAAGGAGTTCTCCGCCGTGTTTCGGAAG 14386 Query 368795 TTTTGGATTGCTGGTTTGAATCAGGTTCTATGCCTTATGGTCAAATACATTATCCATTTG 368854 |||| ||||||||||| ||||| || || ||||| || | |||| || |||||||| | Sbjct 14387 TTTTCGATTGCTGGTTCGAATCCGGCTCAATGCCCTACGCCCAAAATCACTATCCATTCG 14446 Query 368855 ATAA-CGCAAAATACTTTGATAATGATAAAGATTATGTGGCTGATTTTGTAACAGAATCA 368913 | || ||||||| | || | | || | ||| ||| ||||| | | ||| Sbjct 14447 AGAATCGCAAAACA-TTCG---AAGACA---ATTTCCCGGCCGATTTCATCGCCGAAGGC 14499 Query 368914 ATTGATCAAACACGTGGTTGGTTTTATACCCTATTAGTATTATCCACAGCTATTTTCGAT 368973 || |||||||| || || ||||| || || || | || | || ||||| | ||| || Sbjct 14500 ATCGATCAAACTCGCGGCTGGTTCTACACACTTCTCGTTCTCTCAACAGCGCTCTTCAAT 14559 Query 368974 AAACCGGCTTTTAAAAATGT-AATAGTAACTGGTATTGTTAATGCATCTGATGGTCAAAA 369032 |||||| | || |||||| | | | | ||| ||| | ||| || | ||||| || || Sbjct 14560 AAACCGCCATTCAAAAATCTGATTTGCAAC-GGTCTGGTTTTGGCGGCGGATGGACAGAA 14618 Query 369033 GATGTCAAAAAGTAAGGGTAATTATTCCGATCCTAATATTTTAATTGATAAATTTGGTGC 369092 ||||| || |||||| |||||| | ||||| | | | || || || | ||| || Sbjct 14619 AATGTCGAAGAGTAAGAAGAATTATCCGGATCCGATTGGAATTATCGAGAAGTATGGAGC 14678 Query 369093 TGATACTTTGAGATTATA 369110 ||| | |||||||| || Sbjct 14679 CGATGCGTTGAGATTGTA 14696 >seq31637 Length=29668 Score = 107 bits (118), Expect = 2e-17 Identities = 76/87 (87%), Gaps = 0/87 (0%) Strand=Plus/Minus Query 930664 TTGATTTTTCTTCACCAAATATTGCCAAAGAAATGCATATTGGACATTTGCGTTCTACCA 930723 |||||||||| ||||||||||||||||||||||||||| ||||||||||| | ||||| | Sbjct 6673 TTGATTTTTCATCACCAAATATTGCCAAAGAAATGCATGTTGGACATTTGAGATCTACAA 6614 Query 930724 TTATTGGAGAATCTTTATGTAGATTAT 930750 | |||||||| || | ||| |||||| Sbjct 6613 TCATTGGAGATTCGATTTGTCGATTAT 6587 Score = 107 bits (118), Expect = 2e-17 Identities = 76/87 (87%), Gaps = 0/87 (0%) Strand=Plus/Minus Query 930664 TTGATTTTTCTTCACCAAATATTGCCAAAGAAATGCATATTGGACATTTGCGTTCTACCA 930723 |||||||||| ||||||||||||||||| ||||||||| ||||||||||| | ||||| | Sbjct 6812 TTGATTTTTCATCACCAAATATTGCCAAGGAAATGCATGTTGGACATTTGAGATCTACAA 6753 Query 930724 TTATTGGAGAATCTTTATGTAGATTAT 930750 |||||||||| || | ||| |||||| Sbjct 6752 TTATTGGAGATTCGATTTGTCGATTAT 6726 Score = 86.0 bits (94), Expect = 5e-11 Identities = 107/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 931160 TGAGTTTGAAATTCCATTAATATTAGTTAAATCTGATGGAGGATTTACATATGATACCTC 931219 ||| | |||| |||| ||| | |||||||||||||||||||| ||||| ||||| || Sbjct 4217 TGAATGTGAAGTTCCGCTAACTGTTGTTAAATCTGATGGAGGATTCACATACGATACTTC 4158 Query 931220 TGATTTAGCAGCCATTAAATATAGATTTATGGAACAAAAAGTAGATCGTGTAATTTATGT 931279 ||||| || || | |||||| | | | ||| | ||| ||| | | |||||||| Sbjct 4157 AGATTTGGCTGCACTCAAATATCGTATCTTTGAAGAGAAATGCGATTGGGCTATTTATGT 4098 Query 931280 TGTGGATTCAGGTCAAAGTCAACATTT 931306 ||| ||| | || |||||| ||||| Sbjct 4097 TGTTGATGCTGGACAAAGTTTGCATTT 4071 >seq30935 Length=6295 Score = 107 bits (118), Expect = 2e-17 Identities = 159/221 (72%), Gaps = 6/221 (3%) Strand=Plus/Minus Query 563257 AGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTC 563314 |||||||| || | |||||||| ||| ||||| || ||||| || | ||||| | Sbjct 1485 AGACGGAGAACCAAGTGAAGGGTCGACTCCTTTTGG--ATGTTGTAGTCGGAAAGAGTAC 1428 Query 563315 TTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTT 563374 | ||| || |||||||||||||| || || | |||||| ||||| || || ||||||| Sbjct 1427 GTCCATCCTCGAGTTGTTTTCCGGCGAAGATCAATCTTTGTTGATCTGGTGGGATTCCTT 1368 Query 563375 CTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGA 563433 | || ||||| || || ||| || || || || || | | | | | |||||| Sbjct 1367 CCTTGTCTTGGATCTTGGCTTTGACATTTTCGATGGTGTCCGAG-GCCTCGACTTCGAGG 1309 Query 563434 GTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 |||| || ||||| || ||||| || ||||| |||||||| Sbjct 1308 GTAATTGTCTTACCCGTCAGAGTCTTGACGAAGATTTGCAT 1268 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4027521248728910