Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20angaria_20[genbank_20GCA_5F000165025.1_202010-10- 26] 33,559 sequences; 79,761,545 total letters Query= NC_016655.1 Length=51342 Score E Sequences producing significant alignments: (Bits) Value seq17077 120 1e-22 >seq17077 Length=1461 Score = 120 bits (132), Expect = 1e-22 Identities = 116/149 (78%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 24820 ACGGAAAGCTGAGCTGCCAGCTCTACCAGCGCAGCGCGGACGTATTCCTCGGCGTGCCGT 24879 |||| ||||| |||||||||||||||||| || ||| | |||||||| ||||||| Sbjct 1304 ACGGCAAGCTCTCGTGCCAGCTCTACCAGCGCTCTGCCGACATGTTCCTCGGGGTGCCGT 1363 Query 24880 TCAATATCGCGAGCTACGCGCTGCTGACCCATTTCTTCGCGGACCAGCTCGGACTGAAGG 24939 |||||||||| |||||||||||| || | | ||||| | ||| ||| || || Sbjct 1364 TCAATATCGCCTCCTACGCGCTGCTTACGCTCATGGTCGCGCAGCAGACCGGGCTCGAGC 1423 Query 24940 TCGGCGAATTCATCTGGACCGGCGGCGAC 24968 |||||| ||| ||||||||||||||||| Sbjct 1424 CCGGCGAGTTCGTCTGGACCGGCGGCGAC 1452 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 164107374984432