Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20angaria_20[genbank_20GCA_5F000165025.1_202010-10- 26] 33,559 sequences; 79,761,545 total letters Query= NC_019398.1 Length=178193 Score E Sequences producing significant alignments: (Bits) Value seq17077 84.2 2e-11 >seq17077 Length=1461 Score = 84.2 bits (92), Expect = 2e-11 Identities = 123/174 (71%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 39637 TCATCGTTTCCGCATGGAACCCTGTTGATCTGGATGATATGGCTCTGCGTCCGTGTCACT 39696 ||||||| ||||| |||||| | || || || | ||||| || ||||| ||| Sbjct 1220 TCATCGTCTCCGCGTGGAACGTGGCGGAGCTCGACCAGATGGCGCTCGCACCGTGCCACG 1279 Query 39697 GTTTCTTCCAGTTCGTCGTAATCAACGGTAAACTGTCTCTACAGTGGTATCAGCGTTCAG 39756 |||||||||||| ||| | |||| || || || ||| || ||||| || | Sbjct 1280 CGTTCTTCCAGTTCTACGTGGCCGACGGCAAGCTCTCGTGCCAGCTCTACCAGCGCTCTG 1339 Query 39757 TTGATGTCTTCTTAGGGTTGCCGTTCAATATCGCCTCCTACGCTCTCCTGACGC 39810 || | ||| | ||| ||||||||||||||||||||||||| || || |||| Sbjct 1340 CCGACATGTTCCTCGGGGTGCCGTTCAATATCGCCTCCTACGCGCTGCTTACGC 1393 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 569850454538920