Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20angaria_20[genbank_20GCA_5F000165025.1_202010-10- 26] 33,559 sequences; 79,761,545 total letters Query= NC_019516.1 Length=161440 Score E Sequences producing significant alignments: (Bits) Value seq17567 84.2 2e-11 >seq17567 Length=2024 Score = 84.2 bits (92), Expect = 2e-11 Identities = 71/86 (83%), Gaps = 1/86 (1%) Strand=Plus/Minus Query 26912 GCGCAAGTGGCGGAATTGGTAGACGCCCAGGTTTTAGGTACCTGTGCCCTAGTGGCGTGA 26971 |||| |||||||||||||| |||||| | || ||||||| || ||| | | | | ||||| Sbjct 196 GCGCGAGTGGCGGAATTGGCAGACGCGCTGGATTTAGGTTCCAGTGTCTTCG-GACGTGA 138 Query 26972 AGGTTCAAGTCCTTTCTTGCGCATCA 26997 ||||||||||| |||||||||| || Sbjct 137 GGGTTCAAGTCCCTTCTTGCGCACCA 112 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 516263343096000