Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20angaria_20[genbank_20GCA_5F000165025.1_202010-10- 26] 33,559 sequences; 79,761,545 total letters Query= NC_019929.1 Length=243050 Score E Sequences producing significant alignments: (Bits) Value seq17077 86.0 1e-11 >seq17077 Length=1461 Score = 86.0 bits (94), Expect = 1e-11 Identities = 76/95 (80%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 122829 ACCCGGACAACCGCCGTATCATCGTCAGTGCCTGGAACGTGGCTGACCTGGATGAAATGG 122888 |||||||| |||||| |||||||| || ||||||||||| || || || | |||| Sbjct 1202 ACCCGGACTCGCGCCGTCTCATCGTCTCCGCGTGGAACGTGGCGGAGCTCGACCAGATGG 1261 Query 122889 CGTTAGCACCATGCCATGCCTTCTTCCAGTTCTAC 122923 || | ||||| ||||| || ||||||||||||||| Sbjct 1262 CGCTCGCACCGTGCCACGCGTTCTTCCAGTTCTAC 1296 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 777305793096400