Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20angaria_20[genbank_20GCA_5F000165025.1_202010-10- 26] 33,559 sequences; 79,761,545 total letters Query= NC_020486.1 Length=171211 Score E Sequences producing significant alignments: (Bits) Value seq17384 87.8 2e-12 >seq17384 Length=2032 Score = 87.8 bits (96), Expect = 2e-12 Identities = 68/80 (85%), Gaps = 1/80 (1%) Strand=Plus/Plus Query 157687 TTACGGGGTGTAGCGCAGCTTGG-TAGCGCGGTTGCTTTGGGAGCAATAGGTCGCAGGTT 157745 || ||||| ||||| |||||||| ||| ||| ||||||||||| |||||||||||| Sbjct 54 TTTCGGGGCGTAGCTCAGCTTGGCTAGAGCGCCCGCTTTGGGAGCGGGAGGTCGCAGGTT 113 Query 157746 CGAATCCTGTCACCCCGACT 157765 ||||||||||| |||||||| Sbjct 114 CGAATCCTGTCGCCCCGACT 133 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547517426896440