Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20angaria_20[genbank_20GCA_5F000165025.1_202010-10- 26] 33,559 sequences; 79,761,545 total letters Query= NC_020859.1 Length=175430 Score E Sequences producing significant alignments: (Bits) Value seq16951 82.4 9e-11 >seq16951 Length=1564 Score = 82.4 bits (90), Expect = 9e-11 Identities = 56/63 (89%), Gaps = 0/63 (0%) Strand=Plus/Plus Query 161242 TCAGTAGCTCAGCGGATAGAGCAACCGCCTTCTAAGCGGTTGGTCGCAGGTTCAAATCCT 161301 || ||||||||| |||||||||||| ||||||||| | || |||||||||||| |||||| Sbjct 78 TCCGTAGCTCAGTGGATAGAGCAACGGCCTTCTAATCCGTCGGTCGCAGGTTCGAATCCT 137 Query 161302 GCC 161304 ||| Sbjct 138 GCC 140 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 561012563479600