Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20angaria_20[genbank_20GCA_5F000165025.1_202010-10- 26] 33,559 sequences; 79,761,545 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq32157 111 5e-19 >seq32157 Length=43751 Score = 111 bits (122), Expect = 5e-19 Identities = 217/321 (68%), Gaps = 0/321 (0%) Strand=Plus/Plus Query 289023 TTTTTTACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGC 289082 |||| | ||||| ||||||||||| ||||| || | | |||||| ||||| | ||| || Sbjct 16621 TTTTCTTCCAACCGCATCAATTTCATCAATAAACAAAATACACGGCGAATTCTTTCTTGC 16680 Query 289083 AATTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTC 289142 || | ||| | |||| || | | | ||||| ||||||| ||||||| | ||||| Sbjct 16681 CATCGAAAACATGTCTCGAACTCTCGCCGGTCCAACACCAACAAACATTTCCAAGAATTC 16740 Query 289143 AGAAGCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAG 289202 ||| | ||||| || || | ||||| ||||| || || || | || | | Sbjct 16741 CGAACCAGATACAGTTATAAAAGGAACATTGGCTTCACCAGCGGTGGCTTTTGCTAATAA 16800 Query 289203 TGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGC 289262 ||| || || ||||| |||||||| ||| | | ||||| || | ||| || || Sbjct 16801 TGTTTTTCCAGTTCCTGGTGGTCCGGTTAAAATTGCGCCCTTCGGAATTTTCGCTCCCAA 16860 Query 289263 AGACTTATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTGC 289322 | || |||| | ||| | || | || | |||| |||| || ||| |||||| Sbjct 16861 ATCTTTGTATTGTTGAGGATTTTTGAGGAAGTTCACAAATTCCATAATTTCGATTTTTGC 16920 Query 289323 CTCATCACATCCTGCTACATC 289343 ||| ||||| || || ||||| Sbjct 16921 CTCCTCACAACCGGCAACATC 16941 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471184755687383