Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20angaria_20[genbank_20GCA_5F000165025.1_202010-10- 26] 33,559 sequences; 79,761,545 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq18079 91.5 2e-12 >seq18079 Length=1119 Score = 91.5 bits (100), Expect = 2e-12 Identities = 103/137 (75%), Gaps = 6/137 (4%) Strand=Plus/Plus Query 96654 GCCGAGAACCTCATGATCGTCGACCTGGTGCGCAACGACCTGAGCGTGTGCTGCGCGCCC 96713 ||||||||||||||||||||||| || ||||||||||||| ||| | |||| ||| Sbjct 329 GCCGAGAACCTCATGATCGTCGATCTCATGCGCAACGACCTCAGCCGGGTCTGCCGGCCG 388 Query 96714 GGCAGCGTCGTCGTGCCGCCCGGCCGCCTGATGGCGATTGAGACCTACGCCGCCGTGCAC 96773 ||||||||| ||| | |||| ||| | || | |||||| |||| ||||||| Sbjct 389 GGCAGCGTCCGCGT---GGACGGCTTCCTCAGGG---TCGAGACCCACGCGCACGTGCAC 442 Query 96774 CAGATGGTGACCACCGT 96790 ||| | || | |||||| Sbjct 443 CAGCTCGTCAGCACCGT 459 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6104385191303203