Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20angaria_20[genbank_20GCA_5F000165025.1_202010-10- 26] 33,559 sequences; 79,761,545 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq18079 86.0 1e-10 >seq18079 Length=1119 Score = 86.0 bits (94), Expect = 1e-10 Identities = 102/137 (74%), Gaps = 6/137 (4%) Strand=Plus/Plus Query 122738 GCCGAGAACCTCATGATCGTCGACCTGGTGCGCAACGACCTGAGCGTGTGCTGCGCGCCC 122797 ||||||||||||||||||||||| || ||||||||||||| ||| | |||| ||| Sbjct 329 GCCGAGAACCTCATGATCGTCGATCTCATGCGCAACGACCTCAGCCGGGTCTGCCGGCCG 388 Query 122798 GGCAGCGTCGTCGTACCGCCAGGTCGCCTCATGGCGATCGAGACCTATGCCGCCGTGCAC 122857 ||||||||| ||| | || ||||| || |||||||| | || ||||||| Sbjct 389 GGCAGCGTCCGCGT---GGACGGCTTCCTCAGGG---TCGAGACCCACGCGCACGTGCAC 442 Query 122858 CAGATGGTGACCACCGT 122874 ||| | || | |||||| Sbjct 443 CAGCTCGTCAGCACCGT 459 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7912676576107401