Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20angaria_20[genbank_20GCA_5F000165025.1_202010-10- 26] 33,559 sequences; 79,761,545 total letters Query= NC_023572.1 Length=42240 Score E Sequences producing significant alignments: (Bits) Value seq17099 80.6 7e-11 >seq17099 Length=1510 Score = 80.6 bits (88), Expect = 7e-11 Identities = 110/152 (72%), Gaps = 10/152 (7%) Strand=Plus/Minus Query 30744 CTGCACGCAGACCGACCCCGAGGTGTTCTTTCCCGAGAAAGGCGAACCCGTTGGCCCCGC 30803 |||| |||||||||||||||| | |||||| |||||||| |||| | | | ||||| Sbjct 513 CTGCGCGCAGACCGACCCCGAAGCGTTCTTCCCCGAGAAGGGCG-----GATCGACCCGC 459 Query 30804 GCG--CAA---TATCTGCAGGCGGTGCGAAGTGCAGGCGAAGTGCCTGGAGGTTGCACTC 30858 | | ||| |||||| | | |||||||||| | ||||||| || || ||| Sbjct 458 GAGGCCAAGCGCATCTGCGAGAGCTGCGAAGTGCGCTCCGAGTGCCTCGACTACGCGCTC 399 Query 30859 GCCCGCGAAGAAGAGTTCGGCATCTGGGGCGG 30890 ||| ||| || ||||||||||||||||| Sbjct 398 GCCAACGACGAGCGCTTCGGCATCTGGGGCGG 367 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 134992582237116