Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20angaria_20[genbank_20GCA_5F000165025.1_202010-10- 26] 33,559 sequences; 79,761,545 total letters Query= NC_023613.1 Length=204815 Score E Sequences producing significant alignments: (Bits) Value seq29506 87.8 2e-12 >seq29506 Length=33488 Score = 87.8 bits (96), Expect = 2e-12 Identities = 120/166 (72%), Gaps = 4/166 (2%) Strand=Plus/Minus Query 201079 ATTATCCTCAAAAACCACTTGTTACAACTGA--CATTGCAGAATTTAATGGTCTAAATGA 201136 ||||||| |||||||||||||| |||||| || || |||| | | || | ||||| Sbjct 23971 ATTATCCACAAAAACCACTTGTCACAACTCGTTCAATG--GAATATCTTCGTTTCAATGA 23914 Query 201137 ATACCCCAATGGTATTAATGCAATTGTAGCAATTGCATGTTACACTGGATACAATCAAGA 201196 || || ||| |||||||| ||||| || ||| | || ||||||| |||||||| Sbjct 23913 ATTGCCGGCTGGAATTAATGCGATTGTTGCGATTTTGTCGTATTCTGGATATAATCAAGA 23854 Query 201197 AGATAGTGTTATTCTTAATAAAGCATCTATTGAAAGAGGTTTATTC 201242 |||| |||||| | ||||| | | ||||| | || |||||| Sbjct 23853 AGATTCGGTTATTATGAATAATTCGGCAATTGATCGCGGATTATTC 23808 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 655005118231000