Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20angaria_20[genbank_20GCA_5F000165025.1_202010-10- 26] 33,559 sequences; 79,761,545 total letters Query= NC_023697.1 Length=48420 Score E Sequences producing significant alignments: (Bits) Value seq19301 87.8 6e-13 >seq19301 Length=854 Score = 87.8 bits (96), Expect = 6e-13 Identities = 96/128 (75%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 27285 CGGTCACCCGGGTGTAGATCTCGGTGCTCGTCAATGACTGGTGCCGCATCAGTTCCTGCA 27344 |||| ||| |||||||||||| |||| | || | || ||||| | ||||||||||| Sbjct 199 CGGTGACCTGGGTGTAGATCTGGGTGGTGGTGACGGAGGCGTGCCCGAGCAGTTCCTGCA 140 Query 27345 CGGTGCGCAGGTCGACACCGGCCTCAAGCAGCGCGGTGCCGAACCAGTGCCGCAGACAGT 27404 ||||||||| |||| | || | | || || |||| |||| |||||||||| ||| Sbjct 139 CGGTGCGCACGTCGGCCCCACCGGCGAGGAGGTGGGTGGCGAAGGAGTGCCGCAGCGAGT 80 Query 27405 GCGCCGAG 27412 ||| |||| Sbjct 79 GCGGCGAG 72 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 154760701241556