Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20angaria_20[genbank_20GCA_5F000165025.1_202010-10- 26] 33,559 sequences; 79,761,545 total letters Query= NC_023714.1 Length=153882 Score E Sequences producing significant alignments: (Bits) Value seq17206 100 3e-16 >seq17206 Length=1844 Score = 100 bits (110), Expect = 3e-16 Identities = 111/146 (76%), Gaps = 4/146 (3%) Strand=Plus/Minus Query 114283 GGCCCGGGCCGTGGCTCCGCCGGTGGCTCGCTGGTCACCTACGTCATGGGCATCACCTCG 114342 ||||| || |||||||| | || || || ||||| |||||| |||| |||||||| Sbjct 1073 GGCCCCGGTCGTGGCTCGGGCGCGGGATCCATGGTCGCCTACGCCATGCGCATCACCGAT 1014 Query 114343 ATCGACCCGATCAAGTACGACCTGATGTTCGAGCGCTTCATCAACCCGGACCGC--CCCG 114400 |||| ||| | || ||| || || |||||||| ||| ||||||| |||||| | || Sbjct 1013 CTCGATCCGCTGCAGCACGGACTCATCTTCGAGCGATTCCTCAACCCCGACCGCGTCTCG 954 Query 114401 ACTTCCCCGACATCGACGTCGACTTC 114426 | | |||||| |||||||||||||| Sbjct 953 A--TGCCCGACTTCGACGTCGACTTC 930 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 492087888652880