Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20angaria_20[genbank_20GCA_5F000165025.1_202010-10- 26] 33,559 sequences; 79,761,545 total letters Query= NC_023730.1 Length=42594 Score E Sequences producing significant alignments: (Bits) Value seq17099 111 4e-20 >seq17099 Length=1510 Score = 111 bits (122), Expect = 4e-20 Identities = 118/153 (77%), Gaps = 12/153 (8%) Strand=Plus/Minus Query 32700 CTGCACGCAGACCGACCCCGAGGTGTTCTATCCCGAGAAAGGCGAATCGGTTGAACCGGC 32759 |||| |||||||||||||||| | ||||| |||||||| |||| |||| ||| || Sbjct 513 CTGCGCGCAGACCGACCCCGAAGCGTTCTTCCCCGAGAAGGGCGGATCG-----ACCCGC 459 Query 32760 GCGCAC-----CATCTGCGCGCGGTGCGATGTGCGGGCCAAGTGCCTAGAGGTCGCGCTC 32814 | | | |||||||| | | ||||| ||||| || ||||||| || ||||||| Sbjct 458 GAGGCCAAGCGCATCTGCGAGAGCTGCGAAGTGCGCTCCGAGTGCCTCGACTACGCGCTC 399 Query 32815 GCCAACGATGAAGCG-TTCGGCATCTGGGGCGG 32846 |||||||| || ||| ||||||||||||||||| Sbjct 398 GCCAACGACGA-GCGCTTCGGCATCTGGGGCGG 367 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 136124930801448