Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20angaria_20[genbank_20GCA_5F000165025.1_202010-10- 26] 33,559 sequences; 79,761,545 total letters Query= NC_023738.1 Length=106327 Score E Sequences producing significant alignments: (Bits) Value seq16942 95.1 8e-15 >seq16942 Length=2220 Score = 95.1 bits (104), Expect = 8e-15 Identities = 99/130 (76%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 94998 CATTGAGTTGATGAAGCTGGACTTGCCCGATCCGGTCGCGCCAGCCACCAGCAGATGCGG 95057 ||| |||||||||||||| || ||||| || || ||||| || || || ||||| ||||| Sbjct 1007 CATCGAGTTGATGAAGCTCGATTTGCCGGAGCCCGTCGCACCGGCGACGAGCAGGTGCGG 1066 Query 95058 CATCTTGGCCAGGTTCAGGGAGACGTCCTTACCCTCGACGTCCTTGCCCACTGCCACGGT 95117 ||||||||| ||||| | |||| |||| |||||||||||||| | | ||| Sbjct 1067 CATCTTGGCGAGGTTGGCGACGACGAAGCCGCCCTTCACGTCCTTGCCCACGCCGATGGT 1126 Query 95118 CAACGGATGG 95127 || ||| ||| Sbjct 1127 CATCGGGTGG 1136 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 339982490159312