Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20angaria_20[genbank_20GCA_5F000165025.1_202010-10- 26] 33,559 sequences; 79,761,545 total letters Query= NC_024135.1 Length=42392 Score E Sequences producing significant alignments: (Bits) Value seq17099 116 1e-21 >seq17099 Length=1510 Score = 116 bits (128), Expect = 1e-21 Identities = 133/176 (76%), Gaps = 2/176 (1%) Strand=Plus/Minus Query 31502 TGCGCTGTGCCCGCAAACGGATCCCGACGTGTTCTTCCCCGAAAAGGGCGGCAGCACCAA 31561 |||||| ||| |||| || || ||||| | |||||||||||| |||||||| ||| Sbjct 519 TGCGCTCTGCGCGCAGACCGACCCCGAAGCGTTCTTCCCCGAGAAGGGCGGATCGACCCG 460 Query 31562 AGAAGCGAAAGCG-ATCTGTGGGCTGTGCGATGTCCGCAACGAATGCCTGGAGTACGCGT 31620 || || || ||| ||||| | | ||||| || ||| ||| ||||| || |||||| Sbjct 459 CGAGGCCAA-GCGCATCTGCGAGAGCTGCGAAGTGCGCTCCGAGTGCCTCGACTACGCGC 401 Query 31621 TGGCGCACGACGAACGATTCGGCATCTGGGGCGGCTTATCCGAGCGTGACCGGCGC 31676 | || ||||||| || ||||||||||||||||| | |||||||| || || ||| Sbjct 400 TCGCCAACGACGAGCGCTTCGGCATCTGGGGCGGGCTCTCCGAGCGCGAACGTCGC 345 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 135478788400332