Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20angaria_20[genbank_20GCA_5F000165025.1_202010-10- 26] 33,559 sequences; 79,761,545 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq17077 131 2e-25 >seq17077 Length=1461 Score = 131 bits (144), Expect = 2e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 146968 ACAAAGTCCCCCGGCTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAG 147027 || || || || |||| || |||||| || || |||||| || ||||||| |||| Sbjct 1436 ACGAACTCGCCGGGCTCGAGCCCGGTCTGCTGCGCGACCATGAGCGTAAGCAGCGCGTAG 1377 Query 147028 CTGGCTATGTTGAAGGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCAC 147087 ||| || ||||| || ||||| ||| |||||| | || | |||||| ||||||||| Sbjct 1376 GAGGCGATATTGAACGGCACCCCGAGGAACATGTCGGCAGAGCGCTGGTAGAGCTGGCAC 1317 Query 147088 GAGAGCTCCCCGTCGGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATG 147147 ||||||| |||||||||||||| |||||| | | ||||||||| | |||||||| Sbjct 1316 GAGAGCTTGCCGTCGGCCACGTAGAACTGGAAGAACGCGTGGCACGGTGCGAGCGCCATC 1257 Query 147148 GCGGGCAGGTCCGCGGGGTTCCAGGCCGAGAC 147179 | || ||||| |||||| || ||||| Sbjct 1256 TGGTCGAGCTCCGCCACGTTCCACGCGGAGAC 1225 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583243234077600