Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20angaria_20[genbank_20GCA_5F000165025.1_202010-10- 26] 33,559 sequences; 79,761,545 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq18079 89.7 7e-12 >seq18079 Length=1119 Score = 89.7 bits (98), Expect = 7e-12 Identities = 102/136 (75%), Gaps = 6/136 (4%) Strand=Plus/Minus Query 2129731 ACGGTGGTCACCATCTGGTGCACGGCGGCATAGGTCTCGATCGCCATCAGCCGGCCGCGC 2129790 |||||| | || | |||||||||| || | |||||||| || | || |||| | Sbjct 459 ACGGTGCTGACGAGCTGGTGCACGTGCGCGTGGGTCTCGA---CCCTGAGGAAGCCGTCC 403 Query 2129791 GGCACGACGACGCTGCCGGGCGCGCAGCACACGCTCAGGTCGTTGCGCACCAGATCGACG 2129850 ||| ||||||||| ||| |||| | ||| ||||||||||||| ||||||||| Sbjct 402 ---ACGCGGACGCTGCCCGGCCGGCAGACCCGGCTGAGGTCGTTGCGCATGAGATCGACG 346 Query 2129851 ATCATGAGGTTCTCGG 2129866 |||||||||||||||| Sbjct 345 ATCATGAGGTTCTCGG 330 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7174574372768558