Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20angaria_20[genbank_20GCA_5F000165025.1_202010-10- 26] 33,559 sequences; 79,761,545 total letters Query= NC_026598.1 Length=58211 Score E Sequences producing significant alignments: (Bits) Value seq17099 80.6 1e-10 >seq17099 Length=1510 Score = 80.6 bits (88), Expect = 1e-10 Identities = 113/156 (72%), Gaps = 2/156 (1%) Strand=Plus/Minus Query 39565 GCGATCTGCGCGCAGACCGACCCCGAGCTGTGGTTCCCCGACAAAGGGCAATCGACGCGC 39624 ||| |||||||||||||||||||||| || |||||||| || || |||||| ||| Sbjct 518 GCGCTCTGCGCGCAGACCGACCCCGAAGCGTTCTTCCCCGAGAAGGGCGGATCGACCCGC 459 Query 39625 GACGCAAAGCGCATGTGCATGCGCTGCCCGCTGCTCGACGAGTGCCGCGCCCTGGCGCTG 39684 || || |||||||| ||| | ||||| ||| | |||||||| || | ||||| Sbjct 458 GAGGCCAAGCGCATCTGCGAGAGCTGCGAAGTGCGCTCCGAGTGCCTCGACTACGCGCT- 400 Query 39685 CGCGACCCGC-ACCTGGTCGGCGTGTGGGGCGGCCT 39719 ||| | | | | | ||||| | |||||||| || Sbjct 399 CGCCAACGACGAGCGCTTCGGCATCTGGGGCGGGCT 364 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 186079415347134