Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20angaria_20[genbank_20GCA_5F000165025.1_202010-10- 26] 33,559 sequences; 79,761,545 total letters Query= NC_028759.1 Length=58065 Score E Sequences producing significant alignments: (Bits) Value seq17099 87.8 7e-13 >seq17099 Length=1510 Score = 87.8 bits (96), Expect = 7e-13 Identities = 97/127 (76%), Gaps = 2/127 (2%) Strand=Plus/Minus Query 39146 GCGATCTGCGCGCAGACCGACCCCGAGCTGTGGTTCCCCGACAAAGGGCAG-TCGACGCG 39204 ||| |||||||||||||||||||||| || |||||||| |||||| | ||||| || Sbjct 518 GCGCTCTGCGCGCAGACCGACCCCGAAGCGTTCTTCCCCGA-GAAGGGCGGATCGACCCG 460 Query 39205 CGACGCAAAGCGCATGTGCATGCGCTGCCCGCTGCTCGACGAGTGCCGCGCCCTGGCGCT 39264 ||| || |||||||| ||| | ||||| ||| | |||||||| || | ||||| Sbjct 459 CGAGGCCAAGCGCATCTGCGAGAGCTGCGAAGTGCGCTCCGAGTGCCTCGACTACGCGCT 400 Query 39265 CGCCGAC 39271 |||| || Sbjct 399 CGCCAAC 393 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 185612401532466