Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20angaria_20[genbank_20GCA_5F000165025.1_202010-10- 26] 33,559 sequences; 79,761,545 total letters Query= NC_028978.1 Length=60609 Score E Sequences producing significant alignments: (Bits) Value seq17099 100 1e-16 >seq17099 Length=1510 Score = 100 bits (110), Expect = 1e-16 Identities = 90/113 (80%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 38383 TGCGCGCAGACCGACCCCGAAATCTTCTTTCCAGAGCAGGGCGGCAGCACCCGCGAGGCC 38442 ||||||||||||||||||||| ||||| || ||| ||||||| |||||||||||| Sbjct 512 TGCGCGCAGACCGACCCCGAAGCGTTCTTCCCCGAGAAGGGCGGATCGACCCGCGAGGCC 453 Query 38443 AAGCGCATTTGCGGCGGCTGCCAGGTGTCCGACGAGTGCCTCGAATGGGCGCT 38495 |||||||| |||| ||||| | ||| | |||||||||||| | ||||| Sbjct 452 AAGCGCATCTGCGAGAGCTGCGAAGTGCGCTCCGAGTGCCTCGACTACGCGCT 400 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 193749957316818