Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20angaria_20[genbank_20GCA_5F000165025.1_202010-10- 26] 33,559 sequences; 79,761,545 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq32786 86.0 5e-12 >seq32786 Length=16869 Score = 86.0 bits (94), Expect = 5e-12 Identities = 98/132 (74%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 118474 TCAATGTGATTCATATAGACATGAGCATCCCCAATTGTATGTATGAATTCACCAGGTGTA 118533 |||||||||||| ||| ||||||||||| || | || || | |||||||||| | | Sbjct 9252 TCAATGTGATTCGAATAAACATGAGCATCACCCAAAGTGTGCACCAATTCACCAGCTTTT 9193 Query 118534 AGCCCTGTCAGGTGAGCAATCATGTATGTCAACAAACTGTAGCTGGCTACATTAAAAGGA 118593 || || | ||||||||||||| || | | || ||||||||| | ||| || || Sbjct 9192 AGATTCGTAATATGAGCAATCATGTGGGTGAGAAGACCGTAGCTGGCCAAATTGAATGGG 9133 Query 118594 ACACCCAGACCC 118605 ||||| |||||| Sbjct 9132 ACACCGAGACCC 9121 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414307278859276