Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20angaria_20[genbank_20GCA_5F000165025.1_202010-10- 26] 33,559 sequences; 79,761,545 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq17077 118 9e-22 >seq17077 Length=1461 Score = 118 bits (130), Expect = 9e-22 Identities = 134/180 (74%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 29695 GACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTA 29754 ||| ||||| || || || |||||||| || || | |||| ||| || || | ||| Sbjct 1437 GACGAACTCGCCGGGCTCGAGCCCGGTCTGCTGCGCGACCATGAGCGTAAGCAGCGCGTA 1378 Query 29755 GCTGGCGATGTTAAAGGGCACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCA 29814 | |||||| || || ||||||||||| |||||| | || | ||||||||||||||| Sbjct 1377 GGAGGCGATATTGAACGGCACCCCGAGGAACATGTCGGCAGAGCGCTGGTAGAGCTGGCA 1318 Query 29815 CGAGAGCTCTCCGTCGCTCACGTAAAACTGACACATGGCATGGCACGGAGGAAGGGCCAT 29874 |||||||| |||||| |||||| ||||| | | || |||||||| | || ||||| Sbjct 1317 CGAGAGCTTGCCGTCGGCCACGTAGAACTGGAAGAACGCGTGGCACGGTGCGAGCGCCAT 1258 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405997079124274