Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20angaria_20[genbank_20GCA_5F000165025.1_202010-10- 26] 33,559 sequences; 79,761,545 total letters Query= NC_030916.1 Length=56212 Score E Sequences producing significant alignments: (Bits) Value seq17099 80.6 1e-10 >seq17099 Length=1510 Score = 80.6 bits (88), Expect = 1e-10 Identities = 123/173 (71%), Gaps = 2/173 (1%) Strand=Plus/Minus Query 46506 CTCTGCCGCG-AGGTCGACCCGGACCTGTGGTTCCCCGAGCGGGGCGGATCGACCCGCGA 46564 |||||| ||| || |||||| || || ||||||||| |||||||||||||||||| Sbjct 515 CTCTGC-GCGCAGACCGACCCCGAAGCGTTCTTCCCCGAGAAGGGCGGATCGACCCGCGA 457 Query 46565 CGCGAAGCGGATCTGCAGGCGCTGCCCCGTCCAGGAGAAGTGCCTGCAGCAGGCACTCGA 46624 || ||||| |||||| | ||||| || | ||||||| | | || |||| Sbjct 456 GGCCAAGCGCATCTGCGAGAGCTGCGAAGTGCGCTCCGAGTGCCTCGACTACGCGCTCGC 397 Query 46625 CGCGGGGGAGCGGTTCGGAGTGTGGGGCGGCGTCAGCGAACGCGAACGCCGCC 46677 | | ||||| ||||| | |||||||| || ||| |||||||| |||| Sbjct 396 CAACGACGAGCGCTTCGGCATCTGGGGCGGGCTCTCCGAGCGCGAACGTCGCC 344 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 179685164555892