Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20angaria_20[genbank_20GCA_5F000165025.1_202010-10- 26] 33,559 sequences; 79,761,545 total letters Query= NC_031007.1 Length=223935 Score E Sequences producing significant alignments: (Bits) Value seq17077 91.5 2e-13 >seq17077 Length=1461 Score = 91.5 bits (100), Expect = 2e-13 Identities = 103/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 99569 CAGATCGACCAAATCTCCAAGGCCATGGACCAGTTGAAAAACGACCCGGATAACCGTCGT 99628 || |||||||| ||||| ||| || || ||| | ||||||| || ||| Sbjct 1159 CACATCGACCAGATCTCGCAGGTGATCGAGCAGATCCGTTCGAACCCGGACTCGCGCCGT 1218 Query 99629 ATCATCGTGTCGGCATGGAACGTAGCTGACCTCGACGAAATGGCTTTAGCACCGTGCCAC 99688 ||||||| || || |||||||| || || |||||| | ||||| | |||||||||||| Sbjct 1219 CTCATCGTCTCCGCGTGGAACGTGGCGGAGCTCGACCAGATGGCGCTCGCACCGTGCCAC 1278 Query 99689 GCATTCTTCCAGTTCTAC 99706 || ||||||||||||||| Sbjct 1279 GCGTTCTTCCAGTTCTAC 1296 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 716163452307800