Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20angaria_20[genbank_20GCA_5F000165025.1_202010-10- 26] 33,559 sequences; 79,761,545 total letters Query= NC_031010.1 Length=246390 Score E Sequences producing significant alignments: (Bits) Value seq17077 107 3e-18 >seq17077 Length=1461 Score = 107 bits (118), Expect = 3e-18 Identities = 140/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 202549 GACCGTACCGGCACCGGCACGCGCTCCTTGTTCGGGGCCCAGATGCGGTTTGACCTGACC 202608 ||||| ||||| |||||||||||| | ||||||| |||||| || || || ||| || Sbjct 895 GACCGCACCGGAACCGGCACGCGCAGCCTGTTCGGCCGCCAGATCCGCTTCGATCTGGCC 954 Query 202609 GAAGGCTTCCCACTGGTGACCACGAAAAAGGTTCACCTCCGTTCTATCATTCACGAGCTG 202668 || ||||| ||| | ||||| || ||| ||| || || || ||||||| Sbjct 955 GAGTCGTTCCCGCTGCTCACCACCAAGCGGGTGCACTTCAAATCGGTCGCGATCGAGCTG 1014 Query 202669 CTGTGGTTCCTGAAAGGGGACACCAACATCAGTTACCTGAACGATAACGGGGTCACTATC 202728 || ||||||||| || || | ||||| || | ||| | ||| ||||| || || ||| Sbjct 1015 CTCTGGTTCCTGCGCGGCGAGAGCAACACCAAGTTCCTCACCGACAACGGCGTGACCATC 1074 Query 202729 TGGGACGAATGGGC 202742 |||||||| ||||| Sbjct 1075 TGGGACGAGTGGGC 1088 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 787989309614000