Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20angaria_20[genbank_20GCA_5F000165025.1_202010-10- 26] 33,559 sequences; 79,761,545 total letters Query= NC_031080.1 Length=160985 Score E Sequences producing significant alignments: (Bits) Value seq17206 91.5 2e-13 >seq17206 Length=1844 Score = 91.5 bits (100), Expect = 2e-13 Identities = 109/146 (75%), Gaps = 4/146 (3%) Strand=Plus/Minus Query 120467 GGGCCGGGCCGTGGATCCGCCGGAGGCTCGCTGGTCACCTACGTCATGGGCATCACCTCG 120526 || || || ||||| || | || || || ||||| |||||| |||| |||||||| Sbjct 1073 GGCCCCGGTCGTGGCTCGGGCGCGGGATCCATGGTCGCCTACGCCATGCGCATCACCGAT 1014 Query 120527 ATCGATCCGATCAAGTACGACCTGATGTTCGAGCGCTTCATCAACCCGGATCGC--CCCG 120584 |||||||| | || ||| || || |||||||| ||| ||||||| || ||| | || Sbjct 1013 CTCGATCCGCTGCAGCACGGACTCATCTTCGAGCGATTCCTCAACCCCGACCGCGTCTCG 954 Query 120585 ACTTTCCCGACATCGACGTCGACTTC 120610 | | |||||| |||||||||||||| Sbjct 953 A--TGCCCGACTTCGACGTCGACTTC 930 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 514807953869800