Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20angaria_20[genbank_20GCA_5F000165025.1_202010-10- 26] 33,559 sequences; 79,761,545 total letters Query= NC_031253.1 Length=77832 Score E Sequences producing significant alignments: (Bits) Value seq17480 98.7 5e-16 >seq17480 Length=2464 Score = 98.7 bits (108), Expect = 5e-16 Identities = 71/82 (87%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 32887 CCCTGGGGCGGTAGCTCAGTCGGTTAGAGCCACGGACTCATAATCCGTTGGTCGTGGGTT 32946 ||| |||||| |||||||| |||||||||| |||||||||||||||| ||||| ||||| Sbjct 2053 CCCAGGGGCGTTAGCTCAGCCGGTTAGAGCAGCGGACTCATAATCCGTCGGTCGCGGGTT 1994 Query 32947 CGAGCCCCACCCGCCCTACAAA 32968 | |||||| | |||||||| || Sbjct 1993 CAAGCCCCGCACGCCCTACCAA 1972 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 248835784443807